RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ECT2LQ008S8 904 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 TFF2Q03403 129 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 KDSRQ06136 332 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MALLQ13021 153 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MSLNQ13421 630 aaPredicted RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 ZNF235Q14590 738 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 RFTN1Q14699 578 aaPredicted RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 KYNUQ16719 465 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 LEXMQ3ZCV2 418 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ITPRIPL1Q6GPH6 555 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MZT2BQ6NZ67 158 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 RANBP10Q6VN20 620 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ESPNLQ6ZVH7 1005 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 TTLL10Q6ZVT0 673 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 KDELC2Q7Z4H8 507 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 CCDC117Q8IWD4 279 aaPredicted RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 YAF2Q8IY57 180 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SYTL1Q8IYJ3 562 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MPP5Q8N3R9 675 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SLC44A3Q8N4M1 653 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MREGQ8N565 214 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 OR52K1Q8NGK4 314 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 NSMCE1Q8WV22 266 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SERPINB12Q96P63 405 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 XPO6Q96QU8 1125 aaKnown RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 DMRTA2Q96SC8 542 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SEMA3CQ99985 751 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 APOL2Q9BQE5 337 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MGME1Q9BQP7 344 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 PHF7Q9BWX1 381 aaPredicted RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 FUT8Q9BYC5 575 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 PLAC1Q9HBJ0 212 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 NOD2Q9HC29 1040 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SAYSD1Q9NPB0 183 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 EIF2B3Q9NR50 452 aaKnown RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 NINJ2Q9NZG7 142 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 CPNE7Q9UBL6 633 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 PRSS50Q9UI38 385 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ITGB1BP2Q9UKP3 347 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ERVW-1Q9UQF0 538 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 TTLL3Q9Y4R7 772 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 COL4A3Q01955 1670 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 F5P12259 2224 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 MIA3Q5JRA6 1907 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TTC34A8MYJ7 566 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 E7EVH7 732 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 MAP2K7O14733 419 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 FFAR2O15552 330 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PSMD3O43242 534 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ANXA9O76027 345 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PRLP01236 227 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PLA2G1BP04054 148 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 GKP32189 559 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 HSD17B3P37058 310 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ELK3P41970 407 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TNNT3P45378 269 aaPredicted RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 LMAN1P49257 510 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 FNTBP49356 437 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 SERPINH1P50454 418 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 PMS2P54278 862 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 GEMP55040 296 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ARL4CP56559 192 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 GPX6P59796 221 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CRADDP78560 199 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CDK16Q00536 496 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 GABPB1Q06547 395 aaPredicted RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 NSUN2Q08J23 767 aaKnown RBP eCLIP3.55□□□□□ -1.84
MCF2-202ENST00000370573 PDIA2Q13087 525 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 PRPSAP1Q14558 356 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 DMC1Q14565 340 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 STARD3Q14849 445 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PTPRRQ15256 657 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 DLG2Q15700 870 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ADRM1Q16186 407 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PFKFB4Q16877 469 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ITPRIPL2Q3MIP1 535 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CERCAMQ5T4B2 595 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 C1QTNF12Q5T7M4 302 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 EMC10Q5UCC4 262 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 GRAMD4Q6IC98 578 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 LRRC8BQ6P9F7 803 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 NCEH1Q6PIU2 408 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 MTSS1LQ765P7 747 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 HEATR4Q86WZ0 1026 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PHYKPLQ8IUZ5 450 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TMEM151BQ8IW70 566 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 IQCKQ8N0W5 287 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 SH2D3CQ8N5H7 860 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ATP11CQ8NB49 1132 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 IPMKQ8NFU5 416 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ASB15Q8WXK1 588 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TRIM63Q969Q1 353 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 RAX2Q96IS3 184 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 C9orf72Q96LT7 481 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 SMIM14Q96QK8 99 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 NUDCD1Q96RS6 583 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TRIB3Q96RU7 358 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TBL1YQ9BQ87 522 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 FICDQ9BVA6 458 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CINPQ9BW66 212 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms