RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 LINGO3P0C6S8 592 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TBC1D3HP0C7X1 549 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TCEA1P23193 301 aaKnown RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 STOMP27105 288 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 CASP9P55211 416 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 PLEKHG4Q58EX7 1191 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 C9orf131Q5VYM1 1079 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TBC1D3GQ6DHY5 549 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TBC1D3CQ6IPX1 549 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 KCNK18Q7Z418 384 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 PLCZ1Q86YW0 608 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TBC1D3Q8IZP1 549 aaPredicted RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 CENPNQ96H22 339 aaPredicted RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 MFSD14AQ96MC6 490 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF558Q96NG5 402 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 LGR4Q9BXB1 951 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 JCADQ9P266 1359 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 GLYATL1P3A0A0U1RQE8 302 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 ARCN1P48444 511 aaKnown RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 NOMO2Q5JPE7 1267 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TOR1AIP1Q5JTV8 583 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 MCEMP1Q8IX19 187 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 CFAP206Q8IYR0 622 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 CNTD1Q8N815 330 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 JSRP1Q96MG2 331 aaPredicted RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 FMN2Q9NZ56 1722 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 hCG_2039718K7EN88 272 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 ATXN7L2Q5T6C5 722 aaPredicted RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 PRAMEF17Q5VTA0 474 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 FAM43BQ6ZT52 329 aaPredicted RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 LIX1Q8N485 282 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 FAM13CQ8NE31 585 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 OR4K2Q8NGD2 314 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 EZH1Q92800 747 aaPredicted RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 IL1RAPQ9NPH3 570 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 RCOR3Q9P2K3 495 aaPredicted RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF69Q9UC07 566 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 MAU2Q9Y6X3 613 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 H3BUI4 141 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 NOBOXO60393 691 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 WNT3AP56704 352 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 GFOD2Q3B7J2 385 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 GATAD2BQ8WXI9 593 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TCF7L1Q9HCS4 588 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TIMM22Q9Y584 194 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 RCCD1A6NED2 376 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 BTBD19C9JJ37 291 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 AKAP8O43823 692 aaKnown RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TLR5O60602 858 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 ITGB1P05556 798 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 YAP1P46937 504 aaKnown RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 MTMR9Q96QG7 549 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF471Q9BX82 626 aaPredicted RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 FTHL17Q9BXU8 183 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 B3GNT4Q9C0J1 378 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 HMX1Q9NP08 348 aaPredicted RBP12.31□□□□□ -0.44
HCFC1-202ENST00000369984 MIOSQ9NXC5 875 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 TLL2Q9Y6L7 1015 aa12.31□□□□□ -0.44
HCFC1-202ENST00000369984 KIF1AQ12756 1690 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 CYP3A4P08684 503 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 PPM1AP35813 382 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 CCNHP51946 323 aaPredicted RBP12.3□□□□□ -0.44
HCFC1-202ENST00000369984 CRTC2Q53ET0 693 aaPredicted RBP12.3□□□□□ -0.44
HCFC1-202ENST00000369984 VWA5B1Q5TIE3 1220 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 SDHAF4Q5VUM1 108 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 SLC25A25Q6KCM7 469 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 DCLRE1AQ6PJP8 1040 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 ANKS1BQ7Z6G8 1248 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 C11orf65Q8NCR3 313 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 STYXQ8WUJ0 223 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 SMG7Q92540 1137 aaKnown RBP12.3□□□□□ -0.44
HCFC1-202ENST00000369984 RDH8Q9NYR8 311 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 COPS7AQ9UBW8 275 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 KANTRA0A1W2PQU2 76 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 IQCF5A8MTL0 148 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 TTC34A8MYJ7 566 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 PDCD5O14737 125 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 EPHB6O15197 1021 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 ACVR2AP27037 513 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 PGDP52209 483 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 AQP4P55087 323 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 RASGEF1BQ0VAM2 473 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 MAB21L3Q8N8X9 362 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 SRFBP1Q8NEF9 429 aaKnown RBP12.3□□□□□ -0.44
HCFC1-202ENST00000369984 PAK6Q9NQU5 681 aaPredicted RBP12.3□□□□□ -0.44
HCFC1-202ENST00000369984 GIN1Q9NXP7 522 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 RABL2AQ9UBK7 228 aaPredicted RBP12.3□□□□□ -0.44
HCFC1-202ENST00000369984 GRXCR2A6NFK2 248 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 MASP1P48740 699 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 PARP15Q460N3 678 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 GXYLT1Q4G148 440 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 ANO7Q6IWH7 933 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 PRR23BQ6ZRT6 265 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 FCRL2Q96LA5 508 aaPredicted RBP12.3□□□□□ -0.44
HCFC1-202ENST00000369984 ZFP3Q96NJ6 502 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 FEM1AQ9BSK4 669 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 TESMINQ9Y4I5 508 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 PEX2P28328 305 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 NAE1Q13564 534 aa12.3□□□□□ -0.44
HCFC1-202ENST00000369984 BRMS1LQ5PSV4 323 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms