RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 IGF2-ASQ6U949 168 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 FIP1L1Q6UN15 594 aaKnown RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 GTF2IRD2Q86UP8 949 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SCUBE3Q8IX30 993 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SRRM1Q8IYB3 904 aaKnown RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 PGBD5Q8N414 524 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 CCDC33Q8N5R6 958 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 NPWQ8N729 165 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 TTLQ8NG68 377 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 VPS33AQ96AX1 596 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SHDQ96IW2 340 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 BCL7BQ9BQE9 202 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 CCDC77Q9BR77 488 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 OSBPL11Q9BXB4 747 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 NPLQ9BXD5 320 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 MKRN2Q9H000 416 aaKnown RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 TRIT1Q9H3H1 467 aaKnown RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 MLXIPLQ9NP71 852 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SACM1LQ9NTJ5 587 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 CFAP97Q9P2B7 532 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SERGEFQ9UGK8 458 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ENPP5Q9UJA9 477 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 MYRFQ9Y2G1 1151 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ISPDA4D126 451 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 MAP3K6O95382 1288 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 BAG2O95816 211 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 WNT1P04628 370 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 MYL4P12829 197 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 IMPDH1P20839 514 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 RPA3P35244 121 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 CDKL1Q00532 357 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 NFATC3Q12968 1075 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ALFQ53S48 1182 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 PLEKHG7Q6ZR37 379 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 TRIM69Q86WT6 500 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 FRMD1Q8N878 549 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ASCC1Q8N9N2 400 aaKnown RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 OPALINQ96PE5 141 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 HERPUD2Q9BSE4 406 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 MED10Q9BTT4 135 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SLC13A1Q9BZW2 595 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 NMUR2Q9GZQ4 415 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 TRABDQ9H4I3 376 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 FBXO8Q9NRD0 319 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 CSMD1Q96PZ7 3565 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 YKT6O15498 198 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 PTX3P26022 381 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 CORO1AP31146 461 aaKnown RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 HPCAL1P37235 193 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 METAP1P53582 386 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 GAD2Q05329 585 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 INAVAQ3KP66 663 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 TCHHL1Q5QJ38 904 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 SLC9A4Q6AI14 798 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 LAIR1Q6GTX8 287 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 FBXL22Q6P050 247 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 USP30Q70CQ3 517 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ELMOD2Q8IZ81 293 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 CCDC185Q8N715 623 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 TMEM102Q8N9M5 508 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 GALNT6Q8NCL4 622 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 THAP11Q96EK4 314 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 RBM15Q96T37 977 aaKnown RBP eCLIP6.78□□□□□ -1.323e-7■■■■□ 23.4
CSDE1-204ENST00000369530 TBCBQ99426 244 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 YTHDF1Q9BYJ9 559 aaKnown RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 FRMD8Q9BZ67 464 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 FBRSQ9HAH7 460 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 IP6K2Q9UHH9 426 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 SFMBT1Q9UHJ3 866 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 IPO11Q9UI26 975 aaKnown RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 POMPQ9Y244 141 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 SPEF1Q9Y4P9 236 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 HTRA2O43464 458 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 LRCH4O75427 683 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ACSL3O95573 720 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 HOXC4P09017 264 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ATP6V1B1P15313 513 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 HDCP19113 662 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 CD247P20963 164 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 RALGDSQ12967 914 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 KLF1Q13351 362 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 TUBB3Q13509 450 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 TXNRD3NBQ6F5E7 133 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 SH2D5Q6ZV89 423 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 SETD3Q86TU7 594 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 RFX6Q8HWS3 928 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 LIX1LQ8IVB5 337 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ADGRG5Q8IZF4 528 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 APCDD1Q8J025 514 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 FAM109AQ8N4B1 249 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 CPA6Q8N4T0 437 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 KCTD6Q8NC69 237 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 GSDMBQ8TAX9 411 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 PYDC1Q8WXC3 89 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 S100ZQ8WXG8 99 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 DLG3Q92796 817 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 INTS12Q96CB8 462 aaKnown RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 SECISBP2Q96T21 854 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms