RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 FRA10AC1Q70Z53 315 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 LSMEM2Q8N112 164 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 PJA1Q8NG27 643 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 DLG3Q92796 817 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 CLDN23Q96B33 292 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 CNDP1Q96KN2 507 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 CHRDQ9H2X0 955 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 FZD3Q9NPG1 666 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 DNAJC16Q9Y2G8 782 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 C17orf113A0A1B0GUU1 675 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 GPR89AB7ZAQ6 455 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 DLL1O00548 723 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 SLC31A1O15431 190 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 CHRNGP07510 517 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 GPR89BP0CG08 455 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 NUMA1Q14980 2115 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 SYTL3Q4VX76 610 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 UNC50Q53HI1 259 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 ARL13AQ5H913 290 aaPredicted RBP23.43■■□□□ 1.34
SNX3-203ENST00000368979 CFAP157Q5JU67 520 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 DOK6Q6PKX4 331 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 XKR5Q6UX68 686 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 FRMD7Q6ZUT3 714 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 RAB44Q7Z6P3 723 aaPredicted RBP23.43■■□□□ 1.34
SNX3-203ENST00000368979 C11orf96Q7Z7L8 435 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 RFWD2Q8NHY2 731 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 PIWIL2Q8TC59 973 aaKnown RBP23.43■■□□□ 1.34
SNX3-203ENST00000368979 C10orf82Q8WW14 230 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 FOXJ1Q92949 421 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 TMEM159Q96B96 161 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 GSTO2Q9H4Y5 243 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 RDH14Q9HBH5 336 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 MUTYHQ9UIF7 546 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 HAO1Q9UJM8 370 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 CYP8B1Q9UNU6 501 aa23.43■■□□□ 1.34
SNX3-203ENST00000368979 PCYT1BQ9Y5K3 369 aaPredicted RBP23.43■■□□□ 1.34
SNX3-203ENST00000368979 LATO43561 262 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 SNUPNO95149 360 aaKnown RBP23.42■■□□□ 1.34
SNX3-203ENST00000368979 C8GP07360 202 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 PBLDP30039 288 aaPredicted RBP23.42■■□□□ 1.34
SNX3-203ENST00000368979 ALDH18A1P54886 795 aaKnown RBP23.42■■□□□ 1.34
SNX3-203ENST00000368979 PHKG1Q16816 387 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 FOXR1Q6PIV2 292 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 CRTC3Q6UUV7 619 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 RASGRP3Q8IV61 690 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 LILRA3Q8N6C8 439 aaPredicted RBP23.42■■□□□ 1.34
SNX3-203ENST00000368979 PDPRQ8NCN5 879 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 C1QTNF3Q9BXJ4 246 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 UTP6Q9NYH9 597 aaKnown RBP23.42■■□□□ 1.34
SNX3-203ENST00000368979 CD274Q9NZQ7 290 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 MARCOQ9UEW3 520 aaPredicted RBP23.42■■□□□ 1.34
SNX3-203ENST00000368979 ARL2BPQ9Y2Y0 163 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 RAP2CQ9Y3L5 183 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 DOCK9Q9BZ29 2069 aa23.42■■□□□ 1.34
SNX3-203ENST00000368979 NCF1BA6NI72 391 aaPredicted RBP23.41■■□□□ 1.34
SNX3-203ENST00000368979 NCF1CA8MVU1 366 aaPredicted RBP23.41■■□□□ 1.34
SNX3-203ENST00000368979 LIN7AO14910 233 aaPredicted RBP23.41■■□□□ 1.34
SNX3-203ENST00000368979 FFAR2O15552 330 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 SNX2O60749 519 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 SIX3O95343 332 aaPredicted RBP23.41■■□□□ 1.34
SNX3-203ENST00000368979 RPS17P08708 135 aaKnown RBP23.41■■□□□ 1.34
SNX3-203ENST00000368979 NCF1P14598 390 aaPredicted RBP23.41■■□□□ 1.34
SNX3-203ENST00000368979 OXTRP30559 389 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 RPS9P46781 194 aaKnown RBP23.41■■□□□ 1.34
SNX3-203ENST00000368979 GALNT1Q10472 559 aaPredicted RBP23.41■■□□□ 1.34
SNX3-203ENST00000368979 SP140Q13342 867 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 SETDB1Q15047 1291 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 SLC22A15Q8IZD6 547 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 SPEM1Q8N4L4 309 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 ZNF781Q8N8C0 355 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 OR2L2Q8NH16 312 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 ASB11Q8WXH4 323 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 MYOCQ99972 504 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 APOOQ9BUR5 198 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 COG4Q9H9E3 785 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 KCNK13Q9HB14 408 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 FAM8A1Q9UBU6 413 aa23.41■■□□□ 1.34
SNX3-203ENST00000368979 GFYI3L273 518 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 SLC16A5O15375 505 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 POP7O75817 140 aaKnown RBP23.4■■□□□ 1.34
SNX3-203ENST00000368979 ENO2P09104 434 aaPredicted RBP23.4■■□□□ 1.34
SNX3-203ENST00000368979 HNRNPA2B1P22626 353 aaKnown RBP23.4■■□□□ 1.34
SNX3-203ENST00000368979 PREPP48147 710 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 ZSCAN26Q16670 478 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 LRRTM4Q86VH4 590 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 OXR1Q8N573 874 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 ANKS4BQ8N8V4 417 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 HM13Q8TCT9 377 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 TOE1Q96GM8 510 aaKnown RBP23.4■■□□□ 1.34
SNX3-203ENST00000368979 TRMOQ9BU70 441 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 SLC12A9Q9BXP2 914 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 ILKAPQ9H0C8 392 aaPredicted RBP23.4■■□□□ 1.34
SNX3-203ENST00000368979 PNPOQ9NVS9 261 aa23.4■■□□□ 1.34
SNX3-203ENST00000368979 WSB2Q9NYS7 404 aaPredicted RBP23.4■■□□□ 1.34
SNX3-203ENST00000368979 MGAT4DA6NG13 374 aa23.39■■□□□ 1.34
SNX3-203ENST00000368979 LRRC14BA6NHZ5 514 aa23.39■■□□□ 1.34
SNX3-203ENST00000368979 ZNF217O75362 1048 aa23.39■■□□□ 1.34
SNX3-203ENST00000368979 SUPT7LO94864 414 aa23.39■■□□□ 1.34
SNX3-203ENST00000368979 MATN4O95460 622 aa23.39■■□□□ 1.34
SNX3-203ENST00000368979 HOXC4P09017 264 aaPredicted RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms