RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ZDHHC21Q8IVQ6 265 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 NATD1Q8N6N6 113 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 FLCNQ8NFG4 579 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 FNDC8Q8TC99 324 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 ISOC1Q96CN7 298 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 SEMA3GQ9NS98 782 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 CPA4Q9UI42 421 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 SNX7Q9UNH6 387 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 DGKBQ9Y6T7 804 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 CXCR3P49682 368 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 SFT2D3Q587I9 215 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 TRAPPC5Q8IUR0 188 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 CIPCQ9C0C6 399 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 SMPD4Q9NXE4 827 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 RUVBL1Q9Y265 456 aaKnown RBP11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 SLC30A4O14863 429 aa11.65□□□□□ -0.55
CDC42BPA-202ENST00000366764 PRPS1L1P21108 318 aa11.65□□□□□ -0.55
CDC42BPA-202ENST00000366764 DSC2Q02487 901 aa11.65□□□□□ -0.55
CDC42BPA-202ENST00000366764 ATP6AP1Q15904 470 aa11.65□□□□□ -0.55
CDC42BPA-202ENST00000366764 TRPV1Q8NER1 839 aa11.65□□□□□ -0.55
CDC42BPA-202ENST00000366764 PEBP4Q96S96 227 aa11.65□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZDHHC7Q9NXF8 308 aa11.65□□□□□ -0.55
CDC42BPA-202ENST00000366764 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.65□□□□□ -0.55
CDC42BPA-202ENST00000366764 SH3PXD2BA1X283 911 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 EFCAB9A8MZ26 197 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 RCVRNP35243 200 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 C9orf131Q5VYM1 1079 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 CRELD1Q96HD1 420 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 MIPEPQ99797 713 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 COPS4Q9BT78 406 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 TACR2P21452 398 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 GABARAPL2P60520 117 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 BORAQ6PGQ7 559 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 TMEM135Q86UB9 458 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 SMG8Q8ND04 991 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 OR10A6Q8NH74 314 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 USP7Q93009 1102 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 APOLD1Q96LR9 279 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF638Q14966 1978 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 SCN1AP35498 2009 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 UBE2QL1A1L167 161 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 SNAPC5O75971 98 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 HPGDP15428 266 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 UBE2R2Q712K3 238 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 KBTBD6Q86V97 674 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 PCDHGB3Q9Y5G1 929 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 PHIPQ8WWQ0 1821 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 TNFRSF11BO00300 401 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 BUD23O43709 281 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 PRAMEF1O95521 474 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 NR2F1P10589 423 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 HNF4AP41235 474 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 PIGGQ5H8A4 983 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 TMEM214Q6NUQ4 689 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 FAM156AQ8NDB6 213 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 PDLIM1O00151 329 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 HLA-DQB2P05538 268 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 LSAMPQ13449 338 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 PTGES3Q15185 160 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 TWNKQ96RR1 684 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 PCDHAC1Q9H158 963 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 KLHL1Q9NR64 748 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF282Q9UDV7 671 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 HTRA2O43464 458 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 RACGAP1Q9H0H5 632 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZDHHC2Q9UIJ5 367 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 MAGEB17A8MXT2 336 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 CCM2LQ9NUG4 571 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 KIAA1522Q9P206 1035 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 GJA8P48165 433 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 TAF10Q12962 218 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 MAP1SQ66K74 1059 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 OR2T5Q6IEZ7 315 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 TTC29Q8NA56 475 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 OR2T29Q8NH02 315 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 CCDC3Q9BQI4 270 aa11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZFC3H1O60293 1989 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-202ENST00000366764 AMHP03971 560 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 BEX3Q00994 111 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SLC24A5Q71RS6 500 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 C16orf62Q7Z3J2 963 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF655Q8N720 491 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 AZIN2Q96A70 460 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 KLHL5Q96PQ7 755 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SIX4Q9UIU6 781 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 ADM5C9JUS6 153 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 PGRMC2O15173 223 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 C1RP00736 705 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 CFHP08603 1231 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SLURP2P0DP57 97 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 VARSP26640 1264 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SH3D19Q5HYK7 790 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 C10orf53Q8N6V4 93 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 TSSK3Q96PN8 268 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 CRISPLD1Q9H336 500 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 GRXCR2A6NFK2 248 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 ORC5O43913 435 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 LRATO95237 230 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SLC25A14O95258 325 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 EPORP19235 508 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms