RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ARF1P84077 181 aaKnown RBP4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 PLA2G7Q13093 441 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 MFAP5Q13361 173 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 KCNC3Q14003 757 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 TMEM187Q14656 261 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 FFAR4Q5NUL3 377 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 GCNT6Q5T4J0 391 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 ADALQ6DHV7 355 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF790Q6PG37 636 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 PLD3Q8IV08 490 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 ADGRF2Q8IZF7 708 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 L3MBTL4Q8NA19 623 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 TMEM143Q96AN5 459 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 PGAM5Q96HS1 289 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 SLC22A12Q96S37 553 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 CHCHD6Q9BRQ6 235 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 TRAF4Q9BUZ4 470 aaPredicted RBP4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 MRPS28Q9Y2Q9 187 aaKnown RBP4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 STK36Q9NRP7 1315 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 NOTCH3Q9UM47 2321 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 F5H0A9 414 aaPredicted RBP4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 TO15178 435 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 TBX6O95947 436 aaPredicted RBP4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 LIFP15018 202 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 CAPN3P20807 821 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 HOXA13P31271 388 aaPredicted RBP4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 MRPS5P82675 430 aaKnown RBP4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 CCDC6Q16204 474 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 FAM98BQ52LJ0 330 aaKnown RBP4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 CORO6Q6QEF8 472 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF497Q6ZNH5 498 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 FASTKD5Q7L8L6 764 aaKnown RBP4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 TEX19Q8NA77 164 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 PPHLN1Q8NEY8 458 aaKnown RBP4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 SLC47A1Q96FL8 570 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 EGLN1Q9GZT9 426 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 PPIL3Q9H2H8 161 aaKnown RBP4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 HRH4Q9H3N8 390 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 ECHDC1Q9NTX5 307 aa4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 SPIN1Q9Y657 262 aaPredicted RBP4.11□□□□□ -1.75
RNU4-28P-201ENST00000364739 A0A087X002 238 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 A0A1B0GU03 582 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 VILLO15195 856 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 BAIAP3O94812 1187 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZWINTO95229 277 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 H1F0P07305 194 aaKnown RBP4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 FRMD6-AS1P0C7T7 363 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 CEACAM1P13688 526 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF26P17031 533 aaPredicted RBP4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 MFAP4P55083 255 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 SNRPEP62304 92 aaKnown RBP4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 TMF1P82094 1093 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 SP3Q02447 781 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 GAGE2BQ13066 116 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 KRT33BQ14525 404 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 FCN2Q15485 313 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 GAGE2EQ4V326 116 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 GAGE2AQ6NT46 116 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 MOAP1Q96BY2 351 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 ERLEC1Q96DZ1 483 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 SAT2Q96F10 170 aaPredicted RBP4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 BARD1Q99728 777 aaKnown RBP4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 NAP1L4Q99733 375 aaKnown RBP4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 C16orf70Q9BSU1 422 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 ABHD6Q9BV23 337 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 C1QTNF1Q9BXJ1 281 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 OLFML3Q9NRN5 406 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 RHCGQ9UBD6 479 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF69Q9UC07 566 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 GAGE2DQ9UEU5 116 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF215Q9UL58 517 aaPredicted RBP4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 DISP3Q9P2K9 1392 aa4.1□□□□□ -1.75
RNU4-28P-201ENST00000364739 DNM1LO00429 736 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 MITFO75030 526 aaPredicted RBP4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 PRLRP16471 622 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 CEACAM8P31997 349 aaPredicted RBP4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 VEGFCP49767 419 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 RPS18P62269 152 aaKnown RBP4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 PMP22Q01453 160 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 DCAF10Q5QP82 559 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 FAM114A1Q8IWE2 563 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 GPALPP1Q8IXQ4 340 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF383Q8NA42 475 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF485Q8NCK3 441 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 KBTBD8Q8NFY9 601 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 WDR20Q8TBZ3 569 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 SKA1Q96BD8 255 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 CEP295NLQ96MC4 621 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 DACH2Q96NX9 599 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 HHATLQ9HCP6 504 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 CHMP1AQ9HD42 196 aaPredicted RBP4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 OSER1Q9NX31 292 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 CACNG5Q9UF02 275 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 PLAGL1Q9UM63 463 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 RABGAP1Q9Y3P9 1069 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 PYGO1Q9Y3Y4 419 aa4.09□□□□□ -1.75
RNU4-28P-201ENST00000364739 IGKV3D-15A0A087WSY6 115 aa4.08□□□□□ -1.76
RNU4-28P-201ENST00000364739 IGLV9-49A0A0B4J1Y8 123 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms