RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 RCN2Q14257 317 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 BCL7AQ4VC05 210 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 TMEM259Q4ZIN3 620 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 ACSBG2Q5FVE4 666 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 CFAP157Q5JU67 520 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 PLEKHS1Q5SXH7 462 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 ZNF648Q5T619 568 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 CES4AQ5XG92 561 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 PNCKQ6P2M8 343 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 FRA10AC1Q70Z53 315 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 PIWIL4Q7Z3Z4 852 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 HORMAD1Q86X24 394 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 PELI3Q8N2H9 469 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 SPEM1Q8N4L4 309 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 RASGEF1AQ8N9B8 481 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 HMGB4Q8WW32 186 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 ELMO1Q92556 727 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 PLCD4Q9BRC7 762 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 C1QTNF2Q9BXJ5 285 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 FAM126AQ9BYI3 521 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 TRIM39Q9HCM9 518 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 CYP4F12Q9HCS2 524 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 NPHS2Q9NP85 383 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 NCKIPSDQ9NZQ3 722 aa13.61□□□□□ -0.23
PDLIM5-203ENST00000359265 ZFYVE26Q68DK2 2539 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 FRYQ5TBA9 3013 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3DA0A087WVF3 549 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3IA0A087WXS9 549 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3EA0A087X179 549 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3KA0A087X1G2 549 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3FA6NER0 549 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 NEMP2A6NFY4 417 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 PRR5-ARHGAP8B1AHC4 643 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3LB9A6J9 549 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 UBXN8O00124 270 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 EBAG9O00559 213 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ITM2AO43736 263 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 SGTAO43765 313 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 CDK14O94921 469 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ZIC2O95409 532 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 DCNP07585 359 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 GSTM1P09488 218 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3HP0C7X1 549 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 MPC1LP0DKB6 136 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 GFAPP14136 432 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 CCR7P32248 378 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 NAGLUP54802 743 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 NAA20P61599 178 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ARHGAP8P85298 464 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 GSTM4Q03013 218 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 BOP1Q14137 746 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 GBX1Q14549 363 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 IRF4Q15306 451 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ZSCAN26Q16670 478 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 WSCD2Q2TBF2 565 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 SYTL3Q4VX76 610 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3GQ6DHY5 549 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3CQ6IPX1 549 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ZC3H14Q6PJT7 736 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 NAPRTQ6XQN6 538 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ADGRG6Q86SQ4 1221 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TRIM74Q86UV6 250 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 FAM124AQ86V42 546 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 HEATR4Q86WZ0 1026 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 SPATS2Q86XZ4 545 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 GPSM1Q86YR5 675 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TBC1D3Q8IZP1 549 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 FBXO39Q8N4B4 442 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 CCNYL1Q8N7R7 359 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TP53I13Q8NBR0 393 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ASB12Q8WXK4 309 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 FUBP1Q96AE4 644 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 L3HYPDHQ96EM0 354 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ZNF514Q96K75 400 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 SLC17A9Q9BYT1 436 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 DRC3Q9H069 523 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 NUDT4Q9NZJ9 180 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 DLGAP2Q9P1A6 1054 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 NCDNQ9UBB6 729 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 TSR3Q9UJK0 312 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 IKZF3Q9UKT9 509 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ARL2BPQ9Y2Y0 163 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 SPEGQ15772 3267 aa13.6□□□□□ -0.23
PDLIM5-203ENST00000359265 ERICH4A6NGS2 130 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 LRRC72A6NJI9 287 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 RAD51BO15315 384 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 NUAK1O60285 661 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 SNX2O60749 519 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 LYPLA1O75608 230 aaPredicted RBP13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 APBB3O95704 486 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 IMPDH1P20839 514 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 OXTRP30559 389 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 KCNC1P48547 511 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 TPMTP51580 245 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 CTSCP53634 463 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 HERVK_113P63132 956 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 CDK3Q00526 305 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 FGL2Q14314 439 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms