RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 RAD51BO15315 384 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CD3EAPO15446 510 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 KATNA1O75449 491 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 UGT2B4P06133 528 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 MYL3P08590 195 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR4Q2P0C623 313 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CCDC159P0C7I6 412 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 PRKACGP22612 351 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 DNAJB1P25685 340 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 RRM2P31350 389 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 MTHFRP42898 656 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 HLCSP50747 726 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 RENBPP51606 427 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 POLR2JP52435 117 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 DGKQP52824 942 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 BEX3Q00994 111 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TAGLNQ01995 201 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC13A2Q13183 592 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ATP6AP1LQ52LC2 224 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF549Q6P9A3 640 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SPESP1Q6UW49 350 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZDHHC13Q8IUH4 622 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ABI1Q8IZP0 508 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPRC5AQ8NFJ5 357 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 PMEPA1Q969W9 287 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ITCHQ96J02 903 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZFYVE19Q96K21 471 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TSGA13Q96PP4 275 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CYP2S1Q96SQ9 504 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TMLHEQ9NVH6 421 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF221Q9UK13 617 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 EIF3LQ9Y262 564 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 PCDHA9Q9Y5H5 950 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 MAU2Q9Y6X3 613 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZFC3H1O60293 1989 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 NPEPPSL1A6NEC2 478 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 hCG_2039718K7EN88 272 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 IRAK2O43187 625 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF37AP17032 561 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 AGXTP21549 392 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 PCSK1P29120 753 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 AXLP30530 894 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 PLA2G16P53816 162 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ARSFP54793 590 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CHRNB3Q05901 458 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 LCP2Q13094 533 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SELPLGQ14242 412 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TIGD5Q53EQ6 642 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 PAGE2BQ5JRK9 111 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 ANKS6Q68DC2 871 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 MRNIPQ6NTE8 343 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TAF2Q6P1X5 1199 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM126BQ8IXS8 530 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 C8orf59Q8N0T1 100 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPR152Q8TDT2 470 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 NCLNQ969V3 563 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 L3HYPDHQ96EM0 354 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 PGAP3Q96FM1 320 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 EXOC2Q96KP1 924 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SEMA3CQ99985 751 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TRIM54Q9BYV2 358 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 MKRN2Q9H000 416 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC25A51Q9H1U9 297 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 TOR3AQ9H497 397 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 POLR3BQ9NW08 1133 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 MIOSQ9NXC5 875 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 AASSQ9UDR5 926 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 LIMD1Q9UGP4 676 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 BAG5Q9UL15 447 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 SNX5Q9Y5X3 404 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 HS3ST4Q9Y661 456 aa8.13□□□□□ -1.11
CDC42SE1-201ENST00000357235 CENPXA8MT69 81 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 HHLA1C9JL84 531 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 HS6ST1O60243 411 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 B3GALNT1O75752 331 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 THRBP10828 461 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 MBL2P11226 248 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 MTHFD2P13995 350 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 SEMA3AQ14563 771 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CDK10Q15131 360 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF773Q6PK81 442 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CYP20A1Q6UW02 462 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 PRR23BQ6ZRT6 265 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 BHLHA9Q7RTU4 235 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 SPRED1Q7Z699 444 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLCO6A1Q86UG4 719 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CCDC103Q8IW40 242 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CADM2Q8N3J6 435 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM86B1Q8N7N1 296 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 SIMC1Q8NDZ2 872 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 PNPT1Q8TCS8 783 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CSF3RQ99062 836 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 UCKL1Q9NWZ5 548 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CD274Q9NZQ7 290 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 LEF1Q9UJU2 399 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 POLHQ9Y253 713 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 A0A0U1RQS6 177 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 ASPDHA6ND91 283 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 G3V2T6 193 aa8.12□□□□□ -1.11
CDC42SE1-201ENST00000357235 CXCL11O14625 94 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms