RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 LDLRAP1Q5SW96 308 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 CFAP206Q8IYR0 622 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 NETO2Q8NC67 525 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 BRSK1Q8TDC3 778 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 RNF157Q96PX1 679 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 FAM124BQ9H5Z6 455 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 PARPBPQ9NWS1 579 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 HES2Q9Y543 173 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 GRIN2DO15399 1336 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 PRAMEF33A0A0G2JMD5 474 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 SEPT4O43236 478 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 PRAMEF10O60809 474 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 PABPC4LP0CB38 370 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 WASP42768 502 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 FOXM1Q08050 763 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 C2orf80Q0P641 193 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 ACSBG2Q5FVE4 666 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 LAPTM4BQ86VI4 370 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 OR14C36Q8NHC7 312 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 ALG2Q9H553 416 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 CCDC86Q9H6F5 360 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 GMIPQ9P107 970 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 CD84Q9UIB8 345 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 FBXW2Q9UKT8 454 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 EFCAB9A8MZ26 197 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 MRPS6P82932 125 aaKnown RBP11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 MAP1SQ66K74 1059 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 MAP4K3Q8IVH8 894 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 OR2AJ1Q8NGZ0 328 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 CREB3L1Q96BA8 519 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 SIRPGQ9P1W8 387 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 NOX1Q9Y5S8 564 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 CYP17A1P05093 508 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 LAMP2P13473 410 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 HSPB3Q12988 150 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 XKR4Q5GH76 650 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 GHDCQ8N2G8 530 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 CPA6Q8N4T0 437 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 OR4C6Q8NH72 309 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 TMEM168Q9H0V1 697 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 SPATA7Q9P0W8 599 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 TRPS1Q9UHF7 1281 aa11.37□□□□□ -0.59
SPTBN1-202ENST00000356805 ACKR2O00590 384 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 TUBB3Q13509 450 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 PUM1Q14671 1186 aaKnown RBP eCLIP11.36□□□□□ -0.592e-6■■■■□ 20.1
SPTBN1-202ENST00000356805 NOMO2Q5JPE7 1267 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 PITRM1Q5JRX3 1037 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ZNF627Q7L945 461 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ANKS1BQ7Z6G8 1248 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 PLCZ1Q86YW0 608 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ZNF611Q8N823 705 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 KCT2Q8NC54 265 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 OR10H4Q8NGA5 316 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ASB9Q96DX5 294 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ZNF350Q9GZX5 532 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ADGRB3O60242 1522 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 NTSR2O95665 410 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 HADHBP55084 474 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 SLC13A2Q13183 592 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 NADK2Q4G0N4 442 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ANO7Q6IWH7 933 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 FAM43BQ6ZT52 329 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 NAXEQ8NCW5 288 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ZCCHC10Q8TBK6 192 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 HPF1Q9NWY4 346 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 FKBP7Q9Y680 259 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 RBM47A0AV96 593 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 FADS2P1A8MWK0 482 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ADM5C9JUS6 153 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 TBX10O75333 385 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 CCNB2O95067 398 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 APODP05090 189 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 USP4Q13107 963 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ZNF517Q6ZMY9 492 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 CLP1Q92989 425 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 GAS2L1Q99501 681 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 TBC1D17Q9HA65 648 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 L7N2F9 121 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ICAM3P32942 547 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 VAMP2P63027 116 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ATXN7L2Q5T6C5 722 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 OGFRL1Q5TC84 451 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 MKL1Q969V6 931 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 ZNF285Q96NJ3 590 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 TAPBPLQ9BX59 468 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 METTL8Q9H825 291 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 RHPN2P1A8MT19 583 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 PDPK1O15530 556 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 MAPK12P53778 367 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 RASGEF1BQ0VAM2 473 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 GLYATQ6IB77 296 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 CAPN13Q6MZZ7 669 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 IRF2BP2Q7Z5L9 587 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 SLC22A15Q8IZD6 547 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 C12orf29Q8N999 325 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 TTC29Q8NA56 475 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 FNDC8Q8TC99 324 aa11.36□□□□□ -0.59
SPTBN1-202ENST00000356805 RCCD1A6NED2 376 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms