RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ALG2Q9H553 416 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 SAP18O00422 153 aaKnown RBP13.05□□□□□ -0.32
SCN8A-202ENST00000355133 RLN1P04808 185 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 LYNP07948 512 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 CLUP10909 449 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 KCNA5P22460 613 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 CCR10P46092 362 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 CCR3P51677 355 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 C2orf27AQ580R0 203 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 SLCO6A1Q86UG4 719 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 C7orf26Q96N11 449 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 BHLHE41Q9C0J9 482 aaPredicted RBP13.05□□□□□ -0.32
SCN8A-202ENST00000355133 XPNPEP1Q9NQW7 623 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 NKIRAS2Q9NYR9 191 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 MRPS17Q9Y2R5 130 aaKnown RBP13.05□□□□□ -0.32
SCN8A-202ENST00000355133 DHRS7Q9Y394 339 aa13.05□□□□□ -0.32
SCN8A-202ENST00000355133 RIIAD1A6NNX1 92 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 hCG_2039718K7EN88 272 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 AP2A2O94973 939 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 POU2F1P14859 743 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 CTSOP43234 321 aaPredicted RBP13.04□□□□□ -0.32
SCN8A-202ENST00000355133 HNRNPDQ14103 355 aaKnown RBP13.04□□□□□ -0.32
SCN8A-202ENST00000355133 AMZ1Q400G9 498 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 C6orf52Q5T4I8 152 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 SNX33Q8WV41 574 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 GTPBP3Q969Y2 492 aaKnown RBP13.04□□□□□ -0.32
SCN8A-202ENST00000355133 RBM4BQ9BQ04 359 aaKnown RBP13.04□□□□□ -0.32
SCN8A-202ENST00000355133 RBM4Q9BWF3 364 aaKnown RBP13.04□□□□□ -0.32
SCN8A-202ENST00000355133 TAPBPLQ9BX59 468 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 SALL4Q9UJQ4 1053 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 TTC24A2A3L6 582 aaPredicted RBP13.04□□□□□ -0.32
SCN8A-202ENST00000355133 LOC110117498-PIK3R3F6TDL0 507 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 AHCYL1O43865 530 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 PTGER3P43115 390 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 IL18R1Q13478 541 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 TMEM192Q8IY95 271 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 KCT2Q8NC54 265 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 C11orf65Q8NCR3 313 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 PJA1Q8NG27 643 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 C2orf15Q8WU43 125 aaKnown RBP13.04□□□□□ -0.32
SCN8A-202ENST00000355133 NOCTQ9UK39 431 aaKnown RBP13.04□□□□□ -0.32
SCN8A-202ENST00000355133 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCN8A-202ENST00000355133 TM7SF2O76062 418 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 MAGP20916 626 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 CDH12P55289 794 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 CRHR2Q13324 411 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 MYBPC3Q14896 1274 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 ARL10Q8N8L6 244 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 FAM110BQ8TC76 370 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 S100ZQ8WXG8 99 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 ZNF304Q9HCX3 659 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 TESMINQ9Y4I5 508 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 AK5Q9Y6K8 562 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 C8GP07360 202 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 TIE1P35590 1138 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 TGFBR2P37173 567 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 SLC1A2P43004 574 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 CHRNA4P43681 627 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 IL18Q14116 193 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 FBXO42Q6P3S6 717 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 FRRS1Q6ZNA5 592 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 OR10A6Q8NH74 314 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 KBTBD7Q8WVZ9 684 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 SLC38A4Q969I6 547 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 C11orf16Q9NQ32 467 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 RBPJLQ9UBG7 517 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 HMGXB4Q9UGU5 601 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 ZNF180Q9UJW8 692 aa13.04□□□□□ -0.32
SCN8A-202ENST00000355133 NRP1O14786 923 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 TFECO14948 347 aaPredicted RBP13.03□□□□□ -0.32
SCN8A-202ENST00000355133 VNN1O95497 513 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 ESR1P03372 595 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 NSG1P42857 185 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 PTP4A2Q12974 167 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 SLC5A9Q2M3M2 681 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 ECHDC2Q86YB7 292 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 C11orf84Q9BUA3 381 aaPredicted RBP13.03□□□□□ -0.32
SCN8A-202ENST00000355133 PNPLA8Q9NP80 782 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 MRPS30Q9NP92 439 aaKnown RBP13.03□□□□□ -0.32
SCN8A-202ENST00000355133 COPS7AQ9UBW8 275 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 CCDC162PA2VCL2 907 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 ARHGEF33A8MVX0 844 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 MAGEB17A8MXT2 336 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 B3GALT2O43825 422 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 ASLP04424 464 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 CPN2P22792 545 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 STARP49675 285 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 RPS24P62847 133 aaKnown RBP13.03□□□□□ -0.32
SCN8A-202ENST00000355133 SCRN3Q0VDG4 424 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 SOWAHAQ2M3V2 549 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 CARD16Q5EG05 197 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 LDLRAP1Q5SW96 308 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 FSTL5Q8N475 847 aaPredicted RBP13.03□□□□□ -0.32
SCN8A-202ENST00000355133 LRRC57Q8N9N7 239 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 LENG8Q96PV6 779 aaPredicted RBP13.03□□□□□ -0.32
SCN8A-202ENST00000355133 GKN1Q9NS71 199 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 BTN3A3O00478 584 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 PRR5P85299 388 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 SLC8B1Q6J4K2 584 aa13.03□□□□□ -0.32
SCN8A-202ENST00000355133 MFSD5Q6N075 450 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms