RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 USP50Q70EL3 339 aaPredicted RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 IQCHQ86VS3 1027 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 TMEM161BQ8NDZ6 487 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 DNAAF1Q8NEP3 725 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 EPS8L1Q8TE68 723 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 ZBED6CLQ96FA7 236 aaPredicted RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 PCBD2Q9H0N5 130 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 HIPK3Q9H422 1215 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 YAP1P46937 504 aaKnown RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 USP30Q70CQ3 517 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 PQLC1Q8N2U9 271 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 TOP1MTQ969P6 601 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 DUSP16Q9BY84 665 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 ARID1BQ8NFD5 2236 aaPredicted RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 ADAMDEC1O15204 470 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 VNN2O95498 520 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 NR4A1P22736 598 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 KCNJ2P63252 427 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 GTF2H2Q13888 395 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 IDNKQ5T6J7 187 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 GTF2H2CQ6P1K8 395 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 AENQ8WTP8 325 aaKnown RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 SRMSQ9H3Y6 488 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 RHOJQ9H4E5 214 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 CD163L1Q9NR16 1453 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 NPR2P20594 1047 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 RPIAP49247 311 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 DLG4P78352 724 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 CA9Q16790 459 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 PTPN20Q4JDL3 420 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 CDKAL1Q5VV42 579 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 ZSCAN4Q8NAM6 433 aaPredicted RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 TSEN2Q8NCE0 465 aaKnown RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 SCGB3A2Q96PL1 93 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 MRPL45Q9BRJ2 306 aaKnown RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 LYARQ9NX58 379 aaKnown RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 YDJCA8MPS7 323 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 PIAS1O75925 651 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 BLKP51451 505 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CSTF1Q05048 431 aaKnown RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 BNIP1Q12981 228 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CERS6Q6ZMG9 384 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 DCAKDQ8WVC6 231 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 POF1BQ8WVV4 589 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 BTN2A3PQ96KV6 586 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 RCOR3Q9P2K3 495 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 TEX13CA0A0J9YWL9 993 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 TMEM150CB9EJG8 249 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 PVALBP20472 110 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 MPSTP25325 297 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 GBX2P52951 348 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CLPTM1LQ96KA5 538 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 EVLQ9UI08 416 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 PCDHGB7Q9Y5F8 929 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 TACSTD2P09758 323 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 LHCGRP22888 699 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CHST9Q7L1S5 443 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CROCC2H7BZ55 1655 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 H0YGN5 161 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 STK16O75716 305 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 PSKH1P11801 424 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF3P17036 446 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CD47Q08722 323 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 VGLL4Q14135 290 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 FBXO22Q8NEZ5 403 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 TRPM4Q8TD43 1214 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ATPIF1Q9UII2 106 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 PCDHGA10Q9Y5H3 936 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CITO14578 2027 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 SCGB2B2Q4G0G5 96 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 RIMKLBQ9ULI2 386 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 FKTNO75072 461 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 KDM4BO94953 1096 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 DGAT2Q96PD7 388 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF700Q9H0M5 742 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 DUS2Q9NX74 493 aaKnown RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 IFT80Q9P2H3 777 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 DEFA5Q01523 94 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 TAF10Q12962 218 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 GSTCDQ8NEC7 633 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CLCA3PQ9Y6N3 262 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 FABP12A6NFH5 140 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 RGS19P49795 217 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 RORCP51449 518 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ADAM17P78536 824 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 UBXN11Q5T124 520 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC29A4Q7RTT9 530 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 HID1Q8IV36 788 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 SPATA31E1Q6ZUB1 1445 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ILVBLA1L0T0 632 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 MLLT3P42568 568 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CDH12P55289 794 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF565Q8N9K5 539 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 TMEM145Q8NBT3 493 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 LRRC20Q8TCA0 184 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 AZIN2Q96A70 460 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 GLOD4Q9HC38 313 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 SCAMP1O15126 338 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 TRAPPC6AO75865 159 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ST3GAL4Q11206 333 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms