RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ARCN1P48444 511 aaKnown RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 POLR2JP52435 117 aaKnown RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 MAPK10P53779 464 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 UMODL1-AS1Q8N2C9 162 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 RBM15BQ8NDT2 890 aaKnown RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 ITCHQ96J02 903 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 SLC22A14Q9Y267 594 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 MAP4K5Q9Y4K4 846 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 ATP1B2P14415 290 aaPredicted RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 GNAZP19086 355 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 PRKCHP24723 683 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 MAPK12P53778 367 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 DPYSQ14117 519 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 TMEM173Q86WV6 379 aaPredicted RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 LIX1Q8N485 282 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 CPSF7Q8N684 471 aaKnown RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 TMEM145Q8NBT3 493 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 FAM156AQ8NDB6 213 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 MYLIPQ8WY64 445 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 ZSCAN5AQ9BUG6 496 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 CORO1CQ9ULV4 474 aaPredicted RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 KAT7O95251 611 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 CMPK1P30085 196 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 MRGPRX2Q96LB1 330 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 FCRL3Q96P31 734 aaPredicted RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 PSKH2Q96QS6 385 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 GTPBP2Q9BX10 602 aaKnown RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 FNIP2Q9P278 1114 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 CA14Q9ULX7 337 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 HIDE1A8MVS5 230 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 HNRNPA1P09651 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMC6-201ENST00000351948 UROSP10746 265 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 COPZ1P61923 177 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 HSPB3Q12988 150 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 NFATC2Q13469 925 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 R3HCC1LQ7Z5L2 792 aaKnown RBP13.5□□□□□ -0.25
SMC6-201ENST00000351948 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 SLC9A6Q92581 669 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 MOCOSQ96EN8 888 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 CYP8B1Q9UNU6 501 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 LYVE1Q9Y5Y7 322 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 TRIM38O00635 465 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 RECQL5O94762 991 aaPredicted RBP13.49□□□□□ -0.25
SMC6-201ENST00000351948 C8GP07360 202 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 MYOGP15173 224 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 GUCA1AP43080 201 aaPredicted RBP13.49□□□□□ -0.25
SMC6-201ENST00000351948 NEK2P51955 445 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 INTS11Q5TA45 600 aaKnown RBP13.49□□□□□ -0.25
SMC6-201ENST00000351948 TYW3Q6IPR3 259 aaKnown RBP13.49□□□□□ -0.25
SMC6-201ENST00000351948 DEF8Q6ZN54 512 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 CILP2Q8IUL8 1156 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 KCT2Q8NC54 265 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 PHF21AQ96BD5 680 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 DZANK1Q9NVP4 752 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 ZNF232Q9UNY5 417 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 A8MUI8 341 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 TGFB1P01137 390 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 MTHFRP42898 656 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 NAA20P61599 178 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 CYP2U1Q7Z449 544 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 RAD21L1Q9H4I0 556 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 ATXN2Q99700 1313 aaKnown RBP13.49□□□□□ -0.25
SMC6-201ENST00000351948 A8MT66 165 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 IGFBP6P24592 240 aaPredicted RBP13.49□□□□□ -0.25
SMC6-201ENST00000351948 POMZP3Q6PJE2 187 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 CASP12Q6UXS9 341 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 TADA1Q96BN2 335 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 RNF31Q96EP0 1072 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 HHIPL1Q96JK4 782 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 DDX18Q9NVP1 670 aaKnown RBP13.49□□□□□ -0.25
SMC6-201ENST00000351948 SLC9A8Q9Y2E8 581 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 PGLSO95336 258 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 NT5EP21589 574 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 CCR10P46092 362 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 IDH3AP50213 366 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 STC1P52823 247 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 NIPAL4Q0D2K0 466 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 LRRC32Q14392 662 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 PHC3Q8NDX5 983 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 OR2T12Q8NG77 320 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 VANGL1Q8TAA9 524 aaPredicted RBP13.49□□□□□ -0.25
SMC6-201ENST00000351948 MAT2BQ9NZL9 334 aa13.49□□□□□ -0.25
SMC6-201ENST00000351948 GNA13Q14344 377 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 SLC9B1Q4ZJI4 515 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 SUSD1Q6UWL2 747 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 BNIPLQ7Z465 357 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 LRRTM4Q86VH4 590 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 SLC43A3Q8NBI5 491 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 MMADHCQ9H3L0 296 aaPredicted RBP13.48□□□□□ -0.25
SMC6-201ENST00000351948 NSUN3Q9H649 340 aaKnown RBP13.48□□□□□ -0.25
SMC6-201ENST00000351948 COPG1Q9Y678 874 aaKnown RBP13.48□□□□□ -0.25
SMC6-201ENST00000351948 ENO4A6NNW6 628 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 DLX3O60479 287 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 SLC6A2P23975 617 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 PSMB9P28065 219 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.48□□□□□ -0.25
SMC6-201ENST00000351948 IMP4Q96G21 291 aaKnown RBP13.48□□□□□ -0.25
SMC6-201ENST00000351948 TTLL2Q9BWV7 592 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms