RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TNK1Q13470 666 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 BAATQ14032 418 aaPredicted RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 GNA13Q14344 377 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 BAK1Q16611 211 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 KIAA1324Q6UXG2 1013 aaKnown RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 TUBGCP3Q96CW5 907 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 RNF31Q96EP0 1072 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 TRMT61AQ96FX7 289 aaKnown RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 ELOVL4Q9GZR5 314 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 XYLT2Q9H1B5 865 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 OR51E2Q9H255 320 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 MCCC2Q9HCC0 563 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 PTPRHQ9HD43 1115 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 SDR39U1Q9NRG7 319 aaPredicted RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 IGSF5Q9NSI5 407 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 SCAF8Q9UPN6 1271 aaKnown RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 STRCP1A6NGW2 1772 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 ARPC4-TTLL3A0A0A6YYG9 625 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 TYW5A2RUC4 315 aaKnown RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 PIP5K1BO14986 540 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 KATNA1O75449 491 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 CSF2P04141 144 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 ANXA6P08133 673 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 CYP2C8P10632 490 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 MYL9P24844 172 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 SCNN1GP51170 649 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 ATN1P54259 1190 aaPredicted RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 GRAPQ13588 217 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 GALEQ14376 348 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 DPYSL2Q16555 572 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 DUOXA2Q1HG44 320 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 PIK3R6Q5UE93 754 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 SETD6Q8TBK2 473 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 UBE2FQ969M7 185 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 RIBC2Q9H4K1 309 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 ZNF224Q9NZL3 707 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 KLHL8Q9P2G9 620 aaPredicted RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 NRAPQ86VF7 1730 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 TRIP11Q15643 1979 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 CCDC182A6NF36 153 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 NDUFA2O43678 99 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 ETV6P41212 452 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 ETV1P50549 477 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 KCNK10P57789 538 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 TECRLQ5HYJ1 363 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 LETMD1Q6P1Q0 360 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 ANKS3Q6ZW76 656 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 PSTKQ8IV42 348 aaKnown RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 LIX1LQ8IVB5 337 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 UBE2J2Q8N2K1 259 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 CPA6Q8N4T0 437 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 C7orf57Q8NEG2 295 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 MCPH1Q8NEM0 835 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 TESCQ96BS2 214 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 TRAF4Q9BUZ4 470 aaPredicted RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.06□□□□□ -0.32
IFT88-202ENST00000351808 RASSF1Q9NS23 344 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 MAGEL2Q9UJ55 1249 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 UBIAD1Q9Y5Z9 338 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 SLX4Q8IY92 1834 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 HACD1B0YJ81 288 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 TNFRSF21O75509 655 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 MATN4O95460 622 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 MYCLP12524 364 aaPredicted RBP13.05□□□□□ -0.32
IFT88-202ENST00000351808 ZNF37AP17032 561 aaPredicted RBP13.05□□□□□ -0.32
IFT88-202ENST00000351808 TNNI3P19429 210 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 TNFSF8P32971 234 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 DCTP40126 519 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 FOXA1P55317 472 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 SP4Q02446 784 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 STXBP2Q15833 593 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
IFT88-202ENST00000351808 IGSF11Q5DX21 431 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 GARNL3Q5VVW2 1013 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 SYVN1Q86TM6 617 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 PHC2Q8IXK0 858 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 TCTE3Q8IZS6 198 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 LINC00518Q8N0U6 118 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 FBXW5Q969U6 566 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 CHCHD6Q9BRQ6 235 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 ZC3H12CQ9C0D7 883 aaKnown RBP13.05□□□□□ -0.32
IFT88-202ENST00000351808 PRDM12Q9H4Q4 367 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 COMMD8Q9NX08 183 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 CCDC59Q9P031 241 aaKnown RBP13.05□□□□□ -0.32
IFT88-202ENST00000351808 CDH9Q9ULB4 789 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 BTRCQ9Y297 605 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 ORC6Q9Y5N6 252 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 RGS5O15539 181 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 DGAT1O75907 488 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 AP2A1O95782 977 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 LINC00032P0C843 101 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 ACADMP11310 421 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 PPP3CCP48454 512 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 MTPNP58546 118 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 SEMA3BQ13214 749 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 IL18R1Q13478 541 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 LAPTM4AQ15012 233 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 SETMARQ53H47 684 aaPredicted RBP13.05□□□□□ -0.32
IFT88-202ENST00000351808 NECAB2Q7Z6G3 386 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms