RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 RNF11Q9Y3C5 154 aa10.25□□□□□ -0.77
SMPD4-201ENST00000351288 REV3LO60673 3130 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 SEC16AO15027 2179 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 SYNDIG1LA6NDD5 238 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 WASH3PC4AMC7 463 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 TMX2-CTNND1H3BSU7 103 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 FAM58BPP0C7Q3 252 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 PABPC1P11940 636 aaKnown RBP10.24□□□□□ -0.77
SMPD4-201ENST00000351288 ZNF26P17031 533 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-201ENST00000351288 GPNMBQ14956 572 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 PLCL1Q15111 1095 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 CYP51A1Q16850 503 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 UGT3A2Q3SY77 523 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 RAET1GQ6H3X3 334 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-201ENST00000351288 PNPT1Q8TCS8 783 aaKnown RBP10.24□□□□□ -0.77
SMPD4-201ENST00000351288 SLC25A23Q9BV35 468 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 VN1R3Q9BXE9 311 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 BAG5Q9UL15 447 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 MED16Q9Y2X0 877 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 MAGED1Q9Y5V3 778 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-201ENST00000351288 CFAP20Q9Y6A4 193 aaKnown RBP10.24□□□□□ -0.77
SMPD4-201ENST00000351288 ELFN1P0C7U0 828 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 GPX3P22352 226 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 CA5AP35218 305 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 IRS1P35568 1242 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 GSSP48637 474 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 HTR6P50406 440 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 ZNF33AQ06730 810 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 AP1ARQ63HQ0 302 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 KLHDC10Q6PID8 442 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 TRAF7Q6Q0C0 670 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 CHSY3Q70JA7 882 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 UBE2R2Q712K3 238 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-201ENST00000351288 ZNF786Q8N393 782 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 FBXO30Q8TB52 745 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 RNF145Q96MT1 663 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 CCT7Q99832 543 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 Q9H521 79 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 SUV39H2Q9H5I1 410 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 LTB4R2Q9NPC1 389 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 SPASTQ9UBP0 616 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 B4GALT6Q9UBX8 382 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 INSL6Q9Y581 213 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 VWA8A3KMH1 1905 aa10.24□□□□□ -0.77
SMPD4-201ENST00000351288 PIKFYVEQ9Y2I7 2098 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 TRBV23OR9-2A0A075B6M9 112 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 LOC285095A0A1B0GVY8 99 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 GNG14A0A1W2PPG7 69 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 ULK1O75385 1050 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 OR56A5P0C7T3 313 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
SMPD4-201ENST00000351288 ZNF23P17027 643 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 PTPN2P17706 415 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 EN2P19622 333 aaPredicted RBP10.23□□□□□ -0.77
SMPD4-201ENST00000351288 DGKAP23743 735 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 RPIAP49247 311 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 PRMT2P55345 433 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 DNAJB13P59910 316 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 CACNG1Q06432 222 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 SYVN1Q86TM6 617 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 SLC15A3Q8IY34 581 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 FBXL20Q96IG2 436 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 DCUN1D5Q9BTE7 237 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 DPY30Q9C005 99 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 BRD9Q9H8M2 597 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 CMTM6Q9NX76 183 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 GNPTGQ9UJJ9 305 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 ZNF225Q9UK10 706 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 ARIH1Q9Y4X5 557 aaPredicted RBP10.23□□□□□ -0.77
SMPD4-201ENST00000351288 NLRC5Q86WI3 1866 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 MYO1GB0I1T2 1018 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 EPB42P16452 691 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 IL10P22301 178 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 FDXRP22570 491 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 SPAM1P38567 509 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 MTPNP58546 118 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 RHDQ02161 417 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 LCP2Q13094 533 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 GTF2H3Q13889 308 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 SLC2A7Q6PXP3 512 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 OR2T11Q8NH01 316 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 MTERF1Q99551 399 aaKnown RBP10.23□□□□□ -0.77
SMPD4-201ENST00000351288 SH3GL3Q99963 347 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 ARNT2Q9HBZ2 717 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMPD4-201ENST00000351288 GID8Q9NWU2 228 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 SH3BP4Q9P0V3 963 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 PTPRDP23468 1912 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 DRGXA6NNA5 263 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 TTC34A8MYJ7 566 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 VILLO15195 856 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 EPHX1P07099 455 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 MAT2AP31153 395 aaKnown RBP10.23□□□□□ -0.77
SMPD4-201ENST00000351288 PREPP48147 710 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 HK2P52789 917 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 HK3P52790 923 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 IRF8Q02556 426 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 RAB33AQ14088 237 aa10.23□□□□□ -0.77
SMPD4-201ENST00000351288 FLCNQ8NFG4 579 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms