RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 LETMD1Q6P1Q0 360 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 C8orf82Q6P1X6 216 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 AAGABQ6PD74 315 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 VITQ6UXI7 678 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ZNF765Q7L2R6 523 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 CYP2U1Q7Z449 544 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 GOLGA7Q7Z5G4 137 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 SPATA19Q7Z5L4 167 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ADGRG6Q86SQ4 1221 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 FUNDC1Q8IVP5 155 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 HOMEZQ8IX15 550 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 FBXW8Q8N3Y1 598 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 TERB1Q8NA31 727 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 NUP210Q8TEM1 1887 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 GDPD5Q8WTR4 605 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 TSPEARQ8WU66 669 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 BTN2A2Q8WVV5 523 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ASB11Q8WXH4 323 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 SCAMP4Q969E2 229 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ESAMQ96AP7 390 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ARRDC3Q96B67 414 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 RCN3Q96D15 328 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 MRPL38Q96DV4 380 aaKnown RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ZFYVE19Q96K21 471 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 KCNA7Q96RP8 456 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 FAM129BQ96TA1 746 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 TMEM79Q9BSE2 394 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ZSCAN5AQ9BUG6 496 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 RIOK2Q9BVS4 552 aaKnown RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 SPATA16Q9BXB7 569 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 SLC12A9Q9BXP2 914 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ABCG8Q9H221 673 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 NSUN3Q9H649 340 aaKnown RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 EFCAB1Q9HAE3 211 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 ZFP14Q9HCL3 533 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 FBRSL1Q9HCM7 1045 aaKnown RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 SLC52A3Q9NQ40 469 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 SDR39U1Q9NRG7 319 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 THG1LQ9NWX6 298 aaKnown RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 NOP53Q9NZM5 478 aaKnown RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 STX18Q9P2W9 335 aaKnown RBP6.8□□□□□ -1.32
TRIM55-203ENST00000350034 POLG2Q9UHN1 485 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 HCN2Q9UL51 889 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 GPR45Q9Y5Y3 372 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 PTGDR2Q9Y5Y4 395 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 C5orf42Q9H799 3197 aa6.8□□□□□ -1.32
TRIM55-203ENST00000350034 CHD6Q8TD26 2715 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ATP6AP2A0A1C7CYW4 349 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 CFAP99D6REC4 459 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 GFYI3L273 518 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 QSOX1O00391 747 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 AIM2O14862 343 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 WNT9AO14904 365 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 KPNA5O15131 536 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 FKBP6O75344 327 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ATP6AP2O75787 350 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 SLCO2B1O94956 709 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 WDR47O94967 919 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 OR4F21O95013 312 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ANP32DO95626 131 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 SOD1P00441 154 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 OTCP00480 354 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 S100BP04271 92 aaPredicted RBP6.79□□□□□ -1.32
TRIM55-203ENST00000350034 C8GP07360 202 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 SNRPB2P08579 225 aaKnown RBP6.79□□□□□ -1.32
TRIM55-203ENST00000350034 LINC00032P0C843 101 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ETV3P41162 512 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 EIF2DP41214 584 aaKnown RBP6.79□□□□□ -1.32
TRIM55-203ENST00000350034 DPP6P42658 865 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 HSPA7P48741 367 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 NUDT2P50583 147 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 METAP1P53582 386 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 SLC34A1Q06495 639 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 HYAL1Q12794 435 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 STX5Q13190 355 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 SP140Q13342 867 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 RUNX3Q13761 415 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ENPP2Q13822 863 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 GTF2H2Q13888 395 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 CCNIQ14094 377 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ELAVL3Q14576 367 aaKnown RBP6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ZNF234Q14588 700 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 RCN1Q15293 331 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ZRSR2Q15696 482 aaKnown RBP6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ZNF423Q2M1K9 1284 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ZXDCQ2QGD7 858 aaPredicted RBP6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ZNF284Q2VY69 593 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 TMEM52BQ4KMG9 183 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 AGKQ53H12 422 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 PIGGQ5H8A4 983 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 LDLRAP1Q5SW96 308 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 C6orf163Q5TEZ5 329 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 C1orf146Q5VVC0 180 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 PPP2R2DQ66LE6 453 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 ERAP2Q6P179 960 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 GTF2H2CQ6P1K8 395 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 SERPINA13PQ6UXR4 307 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 BNC2Q6ZN30 1099 aaPredicted RBP6.79□□□□□ -1.32
TRIM55-203ENST00000350034 GK5Q6ZS86 529 aa6.79□□□□□ -1.32
TRIM55-203ENST00000350034 Q6ZSR9 355 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms