RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 PDCD2Q16342 344 aaPredicted RBP21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 PHKG1Q16816 387 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 WSCD2Q2TBF2 565 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 CDKL4Q5MAI5 379 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 METTL21CQ5VZV1 264 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 TRIM74Q86UV6 250 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 OR14C36Q8NHC7 312 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 TRPC4APQ8TEL6 797 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 SKA2Q8WVK7 121 aaPredicted RBP21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 SIPA1Q96FS4 1042 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 COX14Q96I36 57 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 EGFL8Q99944 293 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 CCDC28BQ9BUN5 200 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 TRIM54Q9BYV2 358 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 SLC6A17Q9H1V8 727 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 OR2AG1Q9H205 316 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 MID1IP1Q9NPA3 183 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 TCF7L2Q9NQB0 619 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 PTBP2Q9UKA9 531 aaKnown RBP21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 FZD4Q9ULV1 537 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 NCKAP1Q9Y2A7 1128 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 TRPM6Q9BX84 2022 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 SHISA7A6NL88 538 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 UNC5CO95185 931 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 PCCBP05166 539 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 FGF4P08620 206 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 GSTM1P09488 218 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 TEAD1P28347 426 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 SH3BP2P78314 561 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 GSTM4Q03013 218 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 CCINQ13939 588 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 PTCRAQ6ISU1 281 aaPredicted RBP21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 USP30Q70CQ3 517 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 UBE2R2Q712K3 238 aaPredicted RBP21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 KBTBD6Q86V97 674 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 VRK3Q8IV63 474 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 CLYBLQ8N0X4 340 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 PLA2G15Q8NCC3 412 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 OR56A4Q8NGH8 313 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 ASB11Q8WXH4 323 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 DLG3Q92796 817 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 GLMNQ92990 594 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 TMEM159Q96B96 161 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 SLC12A9Q9BXP2 914 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 TNFRSF12AQ9NP84 129 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 ATXN10Q9UBB4 475 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 EIF2B4Q9UI10 523 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 ZFR2Q9UPR6 939 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 ANKRD12Q6UB98 2062 aa21.06■□□□□ 0.96
TSPAN3-202ENST00000346495 E2F3O00716 465 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 MAN2B1O00754 1011 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 GUCA1CO95843 209 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 CDKL1Q00532 357 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 TBCCQ15814 346 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 FBXO48Q5FWF7 155 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 METTL2BQ6P1Q9 378 aaKnown RBP21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 AGAP11Q8TF27 550 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 PRR11Q96HE9 360 aaPredicted RBP21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 LENG8Q96PV6 779 aaPredicted RBP21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 HGH1Q9BTY7 390 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 C1QTNF2Q9BXJ5 285 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 PARVBQ9HBI1 364 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 PREBQ9HCU5 417 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 SEMA4BQ9NPR2 832 aaPredicted RBP21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 MMP17Q9ULZ9 603 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 GPR34Q9UPC5 381 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 TRIM33Q9UPN9 1127 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 FIS1Q9Y3D6 152 aa21.05■□□□□ 0.96
TSPAN3-202ENST00000346495 SLC5A10A0PJK1 596 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 PABPN1LA6NDY0 278 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 ANXA5P08758 320 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 RPIAP49247 311 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 ADPRHP54922 357 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 NCALDP61601 193 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 SGCGQ13326 291 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 Q7L0L9 218 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 HEATR4Q86WZ0 1026 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 TRAPPC5Q8IUR0 188 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 UBTD2Q8WUN7 234 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 RHBDF1Q96CC6 855 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 LINC00615Q96LM1 132 aaPredicted RBP21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 OR52B2Q96RD2 323 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 C1QTNF7Q9BXJ2 289 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 WDR55Q9H6Y2 383 aaPredicted RBP21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 WWOXQ9NZC7 414 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 F5P12259 2224 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 TMEM202A6NGA9 273 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 GFYI3L273 518 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 AZIN1O14977 448 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 HNRNPCL1O60812 293 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 RNGTTO60942 597 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 LILRB5O75023 590 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 DNAJC8O75937 253 aaPredicted RBP21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 FSBPO95073 299 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 HIST1H2AGP0C0S8 130 aaPredicted RBP21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 ACADMP11310 421 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 HIST1H2ADP20671 130 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 CYP2A7P20853 494 aa21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 TARSP26639 723 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-202ENST00000346495 MAPK9P45984 424 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms