RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FDXACB1Q9BRP7 624 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-201ENST00000345617 C11orf16Q9NQ32 467 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 SPTLC1O15269 473 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 CPNE3O75131 537 aaKnown RBP19.13■□□□□ 0.65
HDAC4-201ENST00000345617 CCR10P46092 362 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 CDK18Q07002 472 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 GALNT7Q86SF2 657 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 ZNF227Q86WZ6 799 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 RNF181Q9P0P0 153 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 POMPQ9Y244 141 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 RIC1Q4ADV7 1423 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 OR3A3P47888 321 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 OR3A2P47893 321 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 CXCR3P49682 368 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 C6orf183Q5T699 404 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 BORAQ6PGQ7 559 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 OXR1Q8N573 874 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 DCSTAMPQ9H295 470 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 CD93Q9NPY3 652 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 SNTG2Q9NY99 539 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 SPATA7Q9P0W8 599 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 PTCH2Q9Y6C5 1203 aa19.13■□□□□ 0.65
HDAC4-201ENST00000345617 CD36P16671 472 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 ZNF14P17017 642 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-201ENST00000345617 KCTD19Q17RG1 926 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-201ENST00000345617 SLC9B1Q4ZJI4 515 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 COPZ2Q9P299 210 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 CDH10Q9Y6N8 788 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 SH3BGRLO75368 114 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 SRCP12931 536 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 GOT1P17174 413 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 HTR2AP28223 471 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 SSTP61278 116 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 CACNG1Q06432 222 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 HEPACAMQ14CZ8 416 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 PLEKHH3Q7Z736 793 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 HDAC10Q969S8 669 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 DMRTB1Q96MA1 342 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 DEFB129Q9H1M3 183 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 C14orf166Q9Y224 244 aaKnown RBP19.12■□□□□ 0.65
HDAC4-201ENST00000345617 COLEC10Q9Y6Z7 277 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 C22orf31O95567 290 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 DNAJA1P31689 397 aaKnown RBP19.12■□□□□ 0.65
HDAC4-201ENST00000345617 LIMK2P53671 638 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 TAS2R43P59537 309 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 ZNF782Q6ZMW2 699 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-201ENST00000345617 C3orf67Q6ZVT6 689 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 PHC2Q8IXK0 858 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 LYARQ9NX58 379 aaKnown RBP19.12■□□□□ 0.65
HDAC4-201ENST00000345617 NPEPPSL1A6NEC2 478 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 OR6C70A6NIJ9 312 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 CCRL2O00421 344 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 ELFN1P0C7U0 828 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 DET1Q7L5Y6 550 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 TLCD1Q96CP7 247 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 TCEAL7Q9BRU2 100 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 RSPH9Q9H1X1 276 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-201ENST00000345617 ZNF358Q9NW07 568 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 SH3D21A4FU49 640 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 FAM84AQ96KN4 292 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 CDK5RAP2Q96SN8 1893 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 UBXN7O94888 489 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 AP2A1O95782 977 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 NPPAP01160 153 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 FGF19O95750 216 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 RAB36O95755 333 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 CLUP10909 449 aa19.12■□□□□ 0.65
HDAC4-201ENST00000345617 GBX2P52951 348 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-201ENST00000345617 PRRC2BQ5JSZ5 2229 aaKnown RBP19.12■□□□□ 0.65
HDAC4-201ENST00000345617 PGDP52209 483 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 TMBIM6P55061 237 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 C1orf186Q6ZWK4 172 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 UTS2BQ765I0 119 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 CNPPD1Q9BV87 410 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 LYPLA1O75608 230 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 RPP38P78345 283 aaKnown RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 PPATQ06203 517 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 DLG2Q15700 870 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 KHDC1Q4VXA5 237 aaKnown RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 DOK6Q6PKX4 331 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 DGLUCYQ7Z3D6 616 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 GEMIN6Q8WXD5 167 aaKnown RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 ARHGEF4Q9NR80 690 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 PNPOQ9NVS9 261 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 ABCD2Q9UBJ2 740 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 ZNHIT2Q9UHR6 403 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 PTPRMP28827 1452 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 SPATA31A6Q5VVP1 1343 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 DNAJB1P25685 340 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 QPCTQ16769 361 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 SH3RF1Q7Z6J0 888 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 RDH12Q96NR8 316 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 SLC39A3Q9BRY0 314 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 NEURL4Q96JN8 1562 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 GTF2H2Q13888 395 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 GTF2H2CQ6P1K8 395 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 TESCQ96BS2 214 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 ZBED6CLQ96FA7 236 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 FARSAQ9Y285 508 aaKnown RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 ATP6AP2A0A1C7CYW4 349 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms