RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 OR2T12Q8NG77 320 aa17.54■□□□□ 0.4
VHL-202ENST00000345392 UGT2B28Q9BY64 529 aa17.54■□□□□ 0.4
VHL-202ENST00000345392 IKZF5Q9H5V7 419 aa17.54■□□□□ 0.4
VHL-202ENST00000345392 ACTR8Q9H981 624 aa17.54■□□□□ 0.4
VHL-202ENST00000345392 ZNF229Q9UJW7 825 aa17.54■□□□□ 0.4
VHL-202ENST00000345392 PNMA8BQ9ULN7 279 aaPredicted RBP17.54■□□□□ 0.4
VHL-202ENST00000345392 PFDN6O15212 129 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 PRKD3O94806 890 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 GABARAPO95166 117 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 CHRNA1P02708 482 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 FTH1P02794 183 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 ALOX5P09917 674 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 SLC13A2Q13183 592 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 CATSPEREQ5SY80 951 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 NECAB2Q7Z6G3 386 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 GALNT5Q7Z7M9 940 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 DPP10Q8N608 796 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 ARRDC2Q8TBH0 407 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 MCOLN3Q8TDD5 553 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 GPR21Q99679 349 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 RBM4BQ9BQ04 359 aaKnown RBP17.53■□□□□ 0.4
VHL-202ENST00000345392 RHNO1Q9BSD3 238 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 RBM4Q9BWF3 364 aaKnown RBP17.53■□□□□ 0.4
VHL-202ENST00000345392 TSR3Q9UJK0 312 aaKnown RBP17.53■□□□□ 0.4
VHL-202ENST00000345392 NEUROG3Q9Y4Z2 214 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 MITFO75030 526 aaPredicted RBP17.53■□□□□ 0.4
VHL-202ENST00000345392 THP07101 528 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 PFKLP17858 780 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 STC1P52823 247 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 CRYBB1P53674 252 aaPredicted RBP17.53■□□□□ 0.4
VHL-202ENST00000345392 CDC42EP1Q00587 391 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 CDK5R2Q13319 367 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 RAPSNQ13702 412 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 LAPTM4AQ15012 233 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 SF3B4Q15427 424 aaKnown RBP eCLIP17.53■□□□□ 0.46e-7■■■■□ 20.8
VHL-202ENST00000345392 TXNDC11Q6PKC3 985 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 GPRIN3Q6ZVF9 776 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 PLEKHH3Q7Z736 793 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 ZNF467Q7Z7K2 595 aaPredicted RBP17.53■□□□□ 0.4
VHL-202ENST00000345392 LRRTM3Q86VH5 581 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 PJA1Q8NG27 643 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 RORBQ92753 470 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 NUSAP1Q9BXS6 441 aaKnown RBP17.53■□□□□ 0.4
VHL-202ENST00000345392 DERL2Q9GZP9 239 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 MAGEE1Q9HCI5 957 aa17.53■□□□□ 0.4
VHL-202ENST00000345392 PARNO95453 639 aaKnown RBP17.52■□□□□ 0.4
VHL-202ENST00000345392 NPPAP01160 153 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 GGT5P36269 586 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 GSSP48637 474 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 PCYT1AP49585 367 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 HK3P52790 923 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 IL1RL1Q01638 556 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 NRG1Q02297 640 aaPredicted RBP17.52■□□□□ 0.4
VHL-202ENST00000345392 RAD51Q06609 339 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 DGUOKQ16854 277 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 SDHAF4Q5VUM1 108 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 ZNF691Q5VV52 312 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 CYP20A1Q6UW02 462 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 IL27RAQ6UWB1 636 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 PIK3C3Q8NEB9 887 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 OR6Q1Q8NGQ2 317 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 PSMA8Q8TAA3 256 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 HTRA1Q92743 480 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 RDH12Q96NR8 316 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 SEMA3CQ99985 751 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 NMUR1Q9HB89 426 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 SPC25Q9HBM1 224 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 SYTL2Q9HCH5 934 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 TAS2R13Q9NYV9 303 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 SPATA7Q9P0W8 599 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 ANKMY1Q9P2S6 941 aa17.52■□□□□ 0.4
VHL-202ENST00000345392 POLR3HQ9Y535 204 aaPredicted RBP17.52■□□□□ 0.4
VHL-202ENST00000345392 ARL5CA6NH57 179 aa17.52■□□□□ 0.39
VHL-202ENST00000345392 RPP40O75818 363 aaKnown RBP17.52■□□□□ 0.39
VHL-202ENST00000345392 CELF2O95319 508 aaKnown RBP17.52■□□□□ 0.39
VHL-202ENST00000345392 CYP4B1P13584 511 aa17.52■□□□□ 0.39
VHL-202ENST00000345392 CDKN1CP49918 316 aaPredicted RBP17.52■□□□□ 0.39
VHL-202ENST00000345392 NKX2-5P52952 324 aaPredicted RBP17.52■□□□□ 0.39
VHL-202ENST00000345392 MLLT6P55198 1093 aaPredicted RBP17.52■□□□□ 0.39
VHL-202ENST00000345392 ERVPABLB-1P60509 514 aa17.52■□□□□ 0.39
VHL-202ENST00000345392 LDLRAD1Q5T700 205 aa17.52■□□□□ 0.39
VHL-202ENST00000345392 PAGE2Q7Z2X7 111 aa17.52■□□□□ 0.39
VHL-202ENST00000345392 LGI2Q8N0V4 545 aa17.52■□□□□ 0.39
VHL-202ENST00000345392 ABCC13Q9NSE7 274 aa17.52■□□□□ 0.39
VHL-202ENST00000345392 FAM105AQ9NUU6 356 aa17.52■□□□□ 0.39
VHL-202ENST00000345392 INTS6Q9UL03 887 aaKnown RBP17.52■□□□□ 0.39
VHL-202ENST00000345392 ST3GAL5Q9UNP4 418 aa17.52■□□□□ 0.39
VHL-202ENST00000345392 LOC285095A0A1B0GVY8 99 aa17.51■□□□□ 0.39
VHL-202ENST00000345392 PRMT5O14744 637 aaPredicted RBP17.51■□□□□ 0.39
VHL-202ENST00000345392 SLC22A1O15245 554 aa17.51■□□□□ 0.39
VHL-202ENST00000345392 B3GAT3O94766 335 aa17.51■□□□□ 0.39
VHL-202ENST00000345392 ANGPTL1O95841 491 aa17.51■□□□□ 0.39
VHL-202ENST00000345392 OR4Q2P0C623 313 aa17.51■□□□□ 0.39
VHL-202ENST00000345392 PSMB9P28065 219 aa17.51■□□□□ 0.39
VHL-202ENST00000345392 PCSK1P29120 753 aa17.51■□□□□ 0.39
VHL-202ENST00000345392 CD6P30203 668 aa17.51■□□□□ 0.39
VHL-202ENST00000345392 MRPL19P49406 292 aaKnown RBP17.51■□□□□ 0.39
VHL-202ENST00000345392 PWP1Q13610 501 aa17.51■□□□□ 0.39
VHL-202ENST00000345392 PCBP1Q15365 356 aaKnown RBP eCLIP17.51■□□□□ 0.39
VHL-202ENST00000345392 C18orf21Q32NC0 220 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms