RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 OR4D2P58180 307 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 NAA20P61599 178 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 TXNL4AP83876 142 aaKnown RBP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 HMGCS1Q01581 520 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 TLE2Q04725 743 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 TRAF3Q13114 568 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 APOFQ13790 326 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 RAB33AQ14088 237 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 TRIM60Q495X7 471 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 PPP4R4Q6NUP7 873 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 EP400NLQ6ZTU2 488 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 ZFAND2BQ8WV99 257 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 ZFP14Q9HCL3 533 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 LSM7Q9UK45 103 aaKnown RBP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 SH3BP1Q9Y3L3 701 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 COMMD3-BMI1R4GMX3 469 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 DOCK6Q96HP0 2047 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 SZT2Q5T011 3432 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 NPIPB15A6NHN6 443 aaPredicted RBP14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 H0YJX3 145 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 TEX28O15482 410 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 SEC24DO94855 1032 aaPredicted RBP14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 CLIC3O95833 236 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 OTCP00480 354 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 PPP3CCP48454 512 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 CDH15P55291 814 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 DEFB103AP81534 67 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 PTGR1Q14914 329 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 NHSL2Q5HYW2 709 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 DGKKQ5KSL6 1271 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 GAREM2Q75VX8 874 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 ZBTB2Q8N680 514 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 ZFP28Q8NHY6 868 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 TSPEARQ8WU66 669 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 NCSTNQ92542 709 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 DGCR14Q96DF8 476 aaKnown RBP14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 MTFMTQ96DP5 389 aaKnown RBP14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 ACTL8Q9H568 366 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 SMOXQ9NWM0 555 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 KLQ9UEF7 1012 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 DNAJC14Q6Y2X3 702 aaPredicted RBP14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 RFLNAQ6ZTI6 216 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 TRIML2Q8N7C3 387 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 CYGBQ8WWM9 190 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 PDLIM5Q96HC4 596 aaKnown RBP14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 MPP4Q96JB8 637 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 RPF2Q9H7B2 306 aaKnown RBP14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 ATP13A3Q9H7F0 1226 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 HSFX1Q9UBD0 423 aa14.64□□□□□ -0.07
VIPAS39-202ENST00000343765 DNAH14Q0VDD8 3507 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 DGKAP23743 735 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 GGT5P36269 586 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 GRIK2Q13002 908 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 ARHGEF7Q14155 803 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 FIBCD1Q8N539 461 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 PDPRQ8NCN5 879 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 TRPV3Q8NET8 790 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 RMND5BQ96G75 393 aaPredicted RBP14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 HEBP1Q9NRV9 189 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 OLAHQ9NV23 265 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 NDUFA13Q9P0J0 144 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 OPTCQ9UBM4 332 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 ANAPC2Q9UJX6 822 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 PTBP2Q9UKA9 531 aaKnown RBP14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 OARD1Q9Y530 152 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 ZFC3H1O60293 1989 aaKnown RBP14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 MICAL3Q7RTP6 2002 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 TCRBV5S2A0A599 114 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 GFRA2O00451 464 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 EI24O14681 340 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 H6PDO95479 791 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 IGSF6O95976 241 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 CHRM1P11229 460 aaPredicted RBP14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 HRH2P25021 359 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 SPAM1P38567 509 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 EMX2Q04743 252 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 SLC44A4Q53GD3 710 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 CMTM8Q8IZV2 173 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 GPR26Q8NDV2 337 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 CLHC1Q8NHS4 586 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 SKA2Q8WVK7 121 aaPredicted RBP14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 ASIC4Q96FT7 647 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 CENPNQ96H22 339 aaPredicted RBP14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 VPS50Q96JG6 964 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 VCX3AQ9NNX9 186 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 ZNHIT2Q9UHR6 403 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 INTS6Q9UL03 887 aaKnown RBP14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 MYRFQ9Y2G1 1151 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 PLXNA4Q9HCM2 1894 aa14.63□□□□□ -0.07
VIPAS39-202ENST00000343765 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 A0A1W2PRU2 124 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 DLGAP1O14490 977 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ZNF821O75541 412 aaPredicted RBP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 LATS1O95835 1130 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 GPIP06744 558 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 CCT8P50990 548 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 DET1Q7L5Y6 550 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 HID1Q8IV36 788 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 TCEAL8Q8IYN2 117 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ZNF786Q8N393 782 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms