RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ZCCHC12Q6PEW1 402 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 ARMCX6Q7L4S7 300 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 KAT2AQ92830 837 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 UNC93B1Q9H1C4 597 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 POLE3Q9NRF9 147 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 EIF2B4Q9UI10 523 aaKnown RBP14.81□□□□□ -0.04
UBE3B-202ENST00000342494 ELOVL7A1L3X0 281 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 SLC7A4O43246 635 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 TNFP01375 233 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 CBX5P45973 191 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 CLCN7P51798 805 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 SMU1Q2TAY7 513 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 DCST1Q5T197 706 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 NUP54Q7Z3B4 507 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 BTBD1Q9H0C5 482 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 FZD9O00144 591 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 EDF1O60869 148 aaKnown RBP14.8□□□□□ -0.04
UBE3B-202ENST00000342494 ANPEPP15144 967 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 ZNF8P17098 575 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-202ENST00000342494 SLC1A5Q15758 541 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 KCTD19Q17RG1 926 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-202ENST00000342494 FAM46DQ8NEK8 389 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 MROH2AA6NES4 1674 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 A0A0U1RQF3 1178 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 KRT36O76013 467 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 FABP3P05413 133 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 HSD17B2P37059 387 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 TGFBR2P37173 567 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 MLLT3P42568 568 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-202ENST00000342494 ASPAP45381 313 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 SLC30A6Q6NXT4 461 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 FAM92BQ6ZTR7 304 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 KCT2Q8NC54 265 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 BPIFB1Q8TDL5 484 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 CLEC4CQ8WTT0 213 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 CYB5D2Q8WUJ1 264 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 EFHD2Q96C19 240 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-202ENST00000342494 HBEGFQ99075 208 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 OSBPL11Q9BXB4 747 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 FAM192AQ9GZU8 254 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 NEMP2A6NFY4 417 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 PLGP00747 810 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-202ENST00000342494 ARRB1P49407 418 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-202ENST00000342494 CLEC20AQ6ZU45 233 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 RASGEF1CQ8N431 466 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 LIX1Q8N485 282 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 SNX33Q8WV41 574 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 TNFRSF11BO00300 401 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 RSL1D1O76021 490 aaKnown RBP14.8□□□□□ -0.04
UBE3B-202ENST00000342494 PRKCGP05129 697 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 SLC26A3P40879 764 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 NRG3P56975 720 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 KLF10Q13118 480 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 PDK3Q15120 406 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 SGCBQ16585 318 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 AGAP2Q99490 1192 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 CCDC28BQ9BUN5 200 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 MROH1Q8NDA8 1641 aa14.8□□□□□ -0.04
UBE3B-202ENST00000342494 FADS2P1A8MWK0 482 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 CASKO14936 926 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ZBTB22O15209 634 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 INPPL1O15357 1258 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 PRPS2P11908 318 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 PIGXQ8TBF5 258 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 GPR151Q8TDV0 419 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 C1GALT1C1Q96EU7 318 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 COX4I2Q96KJ9 171 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 DSN1Q9H410 356 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 INTS10Q9NVR2 710 aaKnown RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 OAS3Q9Y6K5 1087 aaKnown RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 UGT2B11O75310 529 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 IFNA6P05013 189 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 RFC2P35250 354 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 GRK6P43250 576 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 PARP8Q8N3A8 854 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 MIPEPQ99797 713 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 GNEQ9Y223 722 aaKnown RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 CLCA3PQ9Y6N3 262 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 MRC1P22897 1456 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 PDPK1O15530 556 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ALOX5P09917 674 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 AHCYP23526 432 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 DNASE1L1P49184 302 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ATXN1P54253 815 aaKnown RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 PPP2R2BQ00005 443 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ITGADQ13349 1161 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ARL13AQ5H913 290 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 SETD7Q8WTS6 366 aaKnown RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 PNPLA3Q9NST1 481 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ARL5AQ9Y689 179 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 IGKV6D-41A0A0C4DH26 115 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ENTPD5O75356 428 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 PFKMP08237 780 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 COL6A1P12109 1028 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 IL7RP16871 459 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 MTHFRP42898 656 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 PTP4A2Q12974 167 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 GALNT5Q7Z7M9 940 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ZNF433Q8N7K0 673 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 SLC35G5Q96KT7 338 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms