RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CPXM2Q8N436 756 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 LIX1Q8N485 282 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 SCAMP4Q969E2 229 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 ELSPBP1Q96BH3 223 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 KCNS3Q9BQ31 491 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 KATNBL1Q9H079 304 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 TAC3Q9UHF0 121 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 PADI2Q9Y2J8 665 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 MFHAS1Q9Y4C4 1052 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 TCEA1P23193 301 aaKnown RBP12.63□□□□□ -0.39
LIN54-201ENST00000340417 JAK1P23458 1154 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 SHMT2P34897 504 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 BDKRB1P46663 353 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 TAF13Q15543 124 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 MIPOL1Q8TD10 442 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 APOLD1Q96LR9 279 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 FIZ1Q96SL8 496 aa12.63□□□□□ -0.39
LIN54-201ENST00000340417 ABHD2P08910 425 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 HNRNPLP14866 589 aaKnown RBP eCLIP12.62□□□□□ -0.39
LIN54-201ENST00000340417 CLNS1AP54105 237 aaKnown RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 GTF2H2Q13888 395 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 GTF2H2CQ6P1K8 395 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 FSTL5Q8N475 847 aaPredicted RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 TRAM1L1Q8N609 369 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 PRR11Q96HE9 360 aaPredicted RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 SNX7Q9UNH6 387 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 SSC5DA1L4H1 1573 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 HEXBP07686 556 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 TCF4P15884 667 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 CCKBRP32239 447 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 NRG3P56975 720 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 OGDHQ02218 1023 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 ZNF544Q6NX49 715 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 Q6ZSR6 202 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 VN1R5Q7Z5H4 357 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 COMMD2Q86X83 199 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 PLXDC1Q8IUK5 500 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 DENND6AQ8IWF6 608 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 TMEM125Q96AQ2 219 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 PIWIL1Q96J94 861 aaKnown RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 LENG8Q96PV6 779 aaPredicted RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 ADNPQ9H2P0 1102 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 NOL11Q9H8H0 719 aaKnown RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 OR1A2Q9Y585 309 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 PDE4DIPQ5VU43 2346 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 MYH7P12883 1935 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 SNTNA6NMZ2 147 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 FAM153BP0C7A2 387 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 HADHBP55084 474 aaKnown RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 ZBTB17Q13105 803 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 FGL2Q14314 439 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 HNRNPA1L2Q32P51 320 aaKnown RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 FAM153CQ494X1 144 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 EGFLAMQ63HQ2 1017 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 GPR180Q86V85 440 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 UMODL1-AS1Q8N2C9 162 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 SLC9A6Q92581 669 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 PSKH2Q96QS6 385 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 MTG2Q9H4K7 406 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 SRCP12931 536 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 IFNGR2P38484 337 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 BNC1Q01954 994 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 ZNF33AQ06730 810 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 ADGRD2Q7Z7M1 963 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 SCD5Q86SK9 330 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 LRRC34Q8IZ02 419 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 GLYATL1Q969I3 302 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 NXNL1Q96CM4 212 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 DCBLD2Q96PD2 775 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 CCT7Q99832 543 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 DUSP23Q9BVJ7 150 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 PLAGL1Q9UM63 463 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 DMTF1Q9Y222 760 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 ANGPT4Q9Y264 503 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 HEMK1Q9Y5R4 338 aaPredicted RBP12.62□□□□□ -0.39
LIN54-201ENST00000340417 LY75O60449 1722 aa12.62□□□□□ -0.39
LIN54-201ENST00000340417 FAM72CH0Y354 149 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 NDUFS4O43181 175 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 DCXO43602 365 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 LCA5LO95447 670 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 TRBC1P01850 177 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 EDN1P05305 212 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 C2P06681 752 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 GLDCP23378 1020 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 WNT7BP56706 349 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 SLC25A11Q02978 314 aaKnown RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 FRG1Q14331 258 aaKnown RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 FAM72AQ5TYM5 149 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 TXNRD3NBQ6F5E7 133 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 FAM72DQ6L9T8 149 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 FAM72BQ86X60 149 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 DACH2Q96NX9 599 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 TBCDQ9BTW9 1192 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 N6AMT1Q9Y5N5 214 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 ACTL7BQ9Y614 415 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 NIPSNAP2O75323 286 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 IMPDH2P12268 514 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 POMZP3Q6PJE2 187 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 BNC2Q6ZN30 1099 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms