RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 HSPA4LO95757 839 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 NEFHP12036 1026 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 HNRNPA2B1P22626 353 aaKnown RBP7.04□□□□□ -1.28
NUP43-201ENST00000340413 GSTM5P46439 218 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 GYS2P54840 703 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 PTPRCAPQ14761 206 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 NFATC4Q14934 902 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 SPATS1Q496A3 300 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 GALNTL6Q49A17 601 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 ABI3BPQ7Z7G0 1075 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 CLYBLQ8N0X4 340 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 MGARPQ8TDB4 240 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 PTERQ96BW5 349 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 KLF6Q99612 283 aaPredicted RBP7.04□□□□□ -1.28
NUP43-201ENST00000340413 BTBD1Q9H0C5 482 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 RASSF4Q9H2L5 321 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 WDR26Q9H7D7 661 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 FGFR1OP2Q9NVK5 253 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 SIRT5Q9NXA8 310 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 ZFR2Q9UPR6 939 aaKnown RBP7.04□□□□□ -1.28
NUP43-201ENST00000340413 DYTNA2CJ06 578 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 H3BQ06 376 aaPredicted RBP7.04□□□□□ -1.28
NUP43-201ENST00000340413 CACNB4O00305 520 aaPredicted RBP7.04□□□□□ -1.28
NUP43-201ENST00000340413 ZNF195O14628 629 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 SNX2O60749 519 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 SERPINA6P08185 405 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 COL9A1P20849 921 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 HRH2P25021 359 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 ARFIP2P53365 341 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 PFN3P60673 137 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 FZD5Q13467 585 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 OR4D1Q15615 310 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 ZSCAN26Q16670 478 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 KCTD19Q17RG1 926 aaPredicted RBP7.04□□□□□ -1.28
NUP43-201ENST00000340413 UNC50Q53HI1 259 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 OGFOD2Q6N063 350 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 PDZD3Q86UT5 571 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 RASGEF1AQ8N9B8 481 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 SIDT2Q8NBJ9 832 aaKnown RBP7.04□□□□□ -1.28
NUP43-201ENST00000340413 MCOLN3Q8TDD5 553 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 ACOX2Q99424 681 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 MVB12BQ9H7P6 319 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 UCK1Q9HA47 277 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 FBRSL1Q9HCM7 1045 aaKnown RBP7.04□□□□□ -1.28
NUP43-201ENST00000340413 UTP6Q9NYH9 597 aaKnown RBP7.04□□□□□ -1.28
NUP43-201ENST00000340413 ANKMY1Q9P2S6 941 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 LNPEPQ9UIQ6 1025 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 PCTPQ9UKL6 214 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 PRSS21Q9Y6M0 314 aa7.04□□□□□ -1.28
NUP43-201ENST00000340413 FOXO6A8MYZ6 492 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 IFRD1O00458 451 aaPredicted RBP7.03□□□□□ -1.28
NUP43-201ENST00000340413 NEMP1O14524 444 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 FPGTO14772 594 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 OTCP00480 354 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 EBLN1P0CF75 366 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 UROSP10746 265 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 GABRG2P18507 467 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 AKT1P31749 480 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 CCR7P32248 378 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 CDKN1CP49918 316 aaPredicted RBP7.03□□□□□ -1.28
NUP43-201ENST00000340413 ARHGAP8P85298 464 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 RELAQ04206 551 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 DMTNQ08495 405 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 LAPTM5Q13571 262 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 TGFBIQ15582 683 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 WSCD2Q2TBF2 565 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 RAET1GQ6H3X3 334 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 FRA10AC1Q70Z53 315 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 RAB42Q8N4Z0 105 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 DEFB123Q8N688 67 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 TMEM159Q96B96 161 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 CD244Q9BZW8 370 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 COG4Q9H9E3 785 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 CDH22Q9UJ99 828 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 LAMA2P24043 3122 aaKnown RBP7.03□□□□□ -1.28
NUP43-201ENST00000340413 TNRC6BQ9UPQ9 1833 aaKnown RBP7.03□□□□□ -1.28
NUP43-201ENST00000340413 FFAR2O15552 330 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 ZBTB14O43829 449 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 OR1I1O60431 355 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 ESRRBO95718 433 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 HIST1H2AGP0C0S8 130 aaPredicted RBP7.03□□□□□ -1.28
NUP43-201ENST00000340413 HIST1H2ADP20671 130 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 RASSF2P50749 326 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 MNAT1P51948 309 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 IRF4Q15306 451 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 SYTL3Q4VX76 610 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 COQ5Q5HYK3 327 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.03□□□□□ -1.28
NUP43-201ENST00000340413 CHSY3Q70JA7 882 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 SPATA19Q7Z5L4 167 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 LSMEM2Q8N112 164 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 OR56A3Q8NH54 315 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 RPLP0P6Q8NHW5 317 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 EEF1AKMT1Q8WVE0 214 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 HIST1H2AHQ96KK5 128 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 TMEM237Q96Q45 408 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 HIST1H2AJQ99878 128 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 PAIP2Q9BPZ3 127 aaKnown RBP7.03□□□□□ -1.28
NUP43-201ENST00000340413 H2AFJQ9BTM1 129 aa7.03□□□□□ -1.28
NUP43-201ENST00000340413 KCNK13Q9HB14 408 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms