RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 GPS1Q13098 491 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 LAMB3Q13751 1172 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 SEMA3AQ14563 771 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 PCID2Q5JVF3 399 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 CAPRIN2Q6IMN6 1127 aaKnown RBP14.93□□□□□ -0.02
PRKN-201ENST00000338468 DUS1LQ6P1R4 473 aaKnown RBP14.93□□□□□ -0.02
PRKN-201ENST00000338468 LRRC8BQ6P9F7 803 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 PACS1Q6VY07 963 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 HM13Q8TCT9 377 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 RSC1A1Q92681 617 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 PEX13Q92968 403 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 PMEPA1Q969W9 287 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 CXorf40BQ96DE9 158 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 NAF1Q96HR8 494 aaKnown RBP14.93□□□□□ -0.02
PRKN-201ENST00000338468 SGSM3Q96HU1 749 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 RMDN2Q96LZ7 410 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 NAP1L3Q99457 506 aaPredicted RBP14.93□□□□□ -0.02
PRKN-201ENST00000338468 EPB41L1Q9H4G0 881 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 TREX1Q9NSU2 369 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 ACSL5Q9ULC5 683 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 SSUH2Q9Y2M2 353 aa14.93□□□□□ -0.02
PRKN-201ENST00000338468 CFAP20Q9Y6A4 193 aaKnown RBP14.93□□□□□ -0.02
PRKN-201ENST00000338468 MN1Q10571 1320 aaPredicted RBP14.92□□□□□ -0.02
PRKN-201ENST00000338468 COL6A6A6NMZ7 2263 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 C17orf113A0A1B0GUU1 675 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 OR1I1O60431 355 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 PHF2O75151 1096 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 TMEM63AO94886 807 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 UBXN7O94888 489 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 C9P02748 559 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 POLBP06746 335 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 MTHFD1P11586 935 aaKnown RBP14.92□□□□□ -0.02
PRKN-201ENST00000338468 MGAT1P26572 445 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 NPY2RP49146 381 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 CDK16Q00536 496 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 ITIH4Q14624 930 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 SNAP47Q5SQN1 464 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 CCDC137Q6PK04 289 aaKnown RBP14.92□□□□□ -0.02
PRKN-201ENST00000338468 AFTPHQ6ULP2 937 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 NLRP9Q7RTR0 991 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 CAND1Q86VP6 1230 aaKnown RBP14.92□□□□□ -0.02
PRKN-201ENST00000338468 RBM12BQ8IXT5 1001 aaKnown RBP14.92□□□□□ -0.02
PRKN-201ENST00000338468 CFAP206Q8IYR0 622 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 PPHLN1Q8NEY8 458 aaKnown RBP14.92□□□□□ -0.02
PRKN-201ENST00000338468 OR4L1Q8NH43 312 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 JPH3Q8WXH2 748 aaPredicted RBP14.92□□□□□ -0.02
PRKN-201ENST00000338468 CPT1BQ92523 772 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 USP7Q93009 1102 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 WBP1Q96G27 269 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 CCM2Q9BSQ5 444 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 OR52A5Q9H2C5 316 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 COG4Q9H9E3 785 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 OCIAD1Q9NX40 245 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 SYBUQ9NX95 663 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 FOXJ2Q9P0K8 574 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 MARCH4Q9P2E8 410 aaPredicted RBP14.92□□□□□ -0.02
PRKN-201ENST00000338468 ACSL6Q9UKU0 697 aa14.92□□□□□ -0.02
PRKN-201ENST00000338468 PIKFYVEQ9Y2I7 2098 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 A8MU76 341 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 NVLO15381 856 aaKnown RBP14.91□□□□□ -0.02
PRKN-201ENST00000338468 PRAMEF10O60809 474 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 AVILO75366 819 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 AP2A2O94973 939 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 ARNTP27540 789 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 NMBRP28336 390 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 PDHA2P29803 388 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 NSG1P42857 185 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 LEPRP48357 1165 aaKnown RBP14.91□□□□□ -0.02
PRKN-201ENST00000338468 MAPK10P53779 464 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 PAPD7Q5XG87 772 aaKnown RBP14.91□□□□□ -0.02
PRKN-201ENST00000338468 JAMLQ86YT9 394 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 MPP5Q8N3R9 675 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 BMPERQ8N8U9 685 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 AGBL5Q8NDL9 886 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 OR6P1Q8NGX9 317 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 C12orf66Q96MD2 445 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 KIFC1Q9BW19 673 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 IL22Q9GZX6 179 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 IMP3Q9NV31 184 aaKnown RBP14.91□□□□□ -0.02
PRKN-201ENST00000338468 AHCTF1Q8WYP5 2266 aa14.91□□□□□ -0.02
PRKN-201ENST00000338468 HECTD1Q9ULT8 2610 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 SLC35G4P0C7Q5 338 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 TCP1P17987 556 aaKnown RBP14.9□□□□□ -0.02
PRKN-201ENST00000338468 CAPZBP47756 277 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 PREPP48147 710 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 FNTAP49354 379 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 PPM1FP49593 454 aaPredicted RBP14.9□□□□□ -0.02
PRKN-201ENST00000338468 GNG11P61952 73 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 PPP1CAP62136 330 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 CLN3Q13286 438 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 GSE1Q14687 1217 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 ARHGAP40Q5TG30 622 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 CES3Q6UWW8 571 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 LDB1Q86U70 411 aaPredicted RBP14.9□□□□□ -0.02
PRKN-201ENST00000338468 PLXDC1Q8IUK5 500 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 KCNE4Q8WWG9 221 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 C9orf72Q96LT7 481 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 ZMYND15Q9H091 742 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 CLMPQ9H6B4 373 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 MRM3Q9HC36 420 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms