RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 Q6ZNB5 142 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 RBFAQ8N0V3 343 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 FIBCD1Q8N539 461 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 ZUFSPQ96AP4 578 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 OSBPL11Q9BXB4 747 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 BRINP2Q9C0B6 783 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 SMOXQ9NWM0 555 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 DNMT3BQ9UBC3 853 aaKnown RBP18.62■□□□□ 0.57
RFTN1-201ENST00000334133 STOML2Q9UJZ1 356 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 SH3BP1Q9Y3L3 701 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 A0A1B0GVG6 124 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 LSM1O15116 133 aaKnown RBP18.61■□□□□ 0.57
RFTN1-201ENST00000334133 MTX2O75431 263 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 EEDO75530 441 aaKnown RBP18.61■□□□□ 0.57
RFTN1-201ENST00000334133 FASP25445 335 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 AP1S1P61966 158 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 RAB33AQ14088 237 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 LCN8Q6JVE9 175 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 RETREG1Q9H6L5 497 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 ZNF696Q9H7X3 374 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 ABCB8Q9NUT2 735 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 H3BSA7 217 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 ILF2Q12905 390 aaKnown RBP18.61■□□□□ 0.57
RFTN1-201ENST00000334133 NHSL2Q5HYW2 709 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 SNX20Q7Z614 316 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 OFCC1Q8IZS5 231 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 CYGBQ8WWM9 190 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 CCT7Q99832 543 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 TRIM54Q9BYV2 358 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 TRIM15Q9C019 465 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 DDX18Q9NVP1 670 aaKnown RBP18.61■□□□□ 0.57
RFTN1-201ENST00000334133 GNPTGQ9UJJ9 305 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 CNOT11Q9UKZ1 510 aaKnown RBP18.61■□□□□ 0.57
RFTN1-201ENST00000334133 PCDHB1Q9Y5F3 818 aa18.61■□□□□ 0.57
RFTN1-201ENST00000334133 NUP214P35658 2090 aaPredicted RBP18.6■□□□□ 0.57
RFTN1-201ENST00000334133 AQP12BA6NM10 295 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 DLGAP1O14490 977 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 BMP2P12643 396 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 ADARP55265 1226 aaKnown RBP18.6■□□□□ 0.57
RFTN1-201ENST00000334133 BNIP2Q12982 314 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 CARM1Q86X55 608 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 AQP12AQ8IXF9 295 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 ZBTB2Q8N680 514 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 ANKFN1Q8N957 763 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 TSPAN14Q8NG11 270 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 ASIC4Q96FT7 647 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 DUS3LQ96G46 650 aaKnown RBP18.6■□□□□ 0.57
RFTN1-201ENST00000334133 RNF145Q96MT1 663 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 FAM126AQ9BYI3 521 aaPredicted RBP18.6■□□□□ 0.57
RFTN1-201ENST00000334133 MRPS26Q9BYN8 205 aaKnown RBP18.6■□□□□ 0.57
RFTN1-201ENST00000334133 AGPAT4Q9NRZ5 378 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 CCL26Q9Y258 94 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 SLC4A7Q9Y6M7 1214 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 FAM234BA2RU67 622 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 EI24O14681 340 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 HRH2P25021 359 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 ACRV1P26436 265 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 LRRC66Q68CR7 880 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 EFL1Q7Z2Z2 1120 aaKnown RBP18.6■□□□□ 0.57
RFTN1-201ENST00000334133 ZFAND4Q86XD8 727 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 KRTCAP2Q8N6L1 136 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 TRIML2Q8N7C3 387 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 FBXL20Q96IG2 436 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 VPS50Q96JG6 964 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 OLAHQ9NV23 265 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 LOC730098B7Z3J9 87 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 FKTNO75072 461 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 RGS4P49798 205 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 PCBP2Q15366 365 aaKnown RBP eCLIP18.6■□□□□ 0.572e-18■■■■■ 75.4
RFTN1-201ENST00000334133 CPSF6Q16630 551 aaKnown RBP eCLIP18.6■□□□□ 0.57
RFTN1-201ENST00000334133 PLEKHG6Q3KR16 790 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 PDCD4Q53EL6 469 aaKnown RBP18.6■□□□□ 0.57
RFTN1-201ENST00000334133 PPP4R4Q6NUP7 873 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 CERS6Q6ZMG9 384 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 ZNF783Q6ZMS7 281 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 PYCR2Q96C36 320 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 MPP4Q96JB8 637 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 ZDHHC6Q9H6R6 413 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 OPTCQ9UBM4 332 aa18.6■□□□□ 0.57
RFTN1-201ENST00000334133 LSM7Q9UK45 103 aaKnown RBP18.6■□□□□ 0.57
RFTN1-201ENST00000334133 HNRNPRO43390 633 aaKnown RBP18.59■□□□□ 0.57
RFTN1-201ENST00000334133 DFNA5O60443 496 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 ACRP10323 421 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 CDKN3Q16667 212 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 OTUD3Q5T2D3 398 aaPredicted RBP18.59■□□□□ 0.57
RFTN1-201ENST00000334133 CRTC1Q6UUV9 634 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 MAGEE2Q8TD90 523 aaPredicted RBP18.59■□□□□ 0.57
RFTN1-201ENST00000334133 SLC22A17Q8WUG5 538 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 MRPS31Q92665 395 aaKnown RBP18.59■□□□□ 0.57
RFTN1-201ENST00000334133 BIRC7Q96CA5 298 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 CEP295NLQ96MC4 621 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 ATP13A3Q9H7F0 1226 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 HCFC1R1Q9NWW0 138 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 SLCO3A1Q9UIG8 710 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 PTBP2Q9UKA9 531 aaKnown RBP18.59■□□□□ 0.57
RFTN1-201ENST00000334133 TGM5O43548 720 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 OTCP00480 354 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 HSPA14Q0VDF9 509 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 ATP13A5Q4VNC0 1218 aa18.59■□□□□ 0.57
RFTN1-201ENST00000334133 SLC39A5Q6ZMH5 540 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms