RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 VPS35Q96QK1 796 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 CD244Q9BZW8 370 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 COQ6Q9Y2Z9 468 aa16.65■□□□□ 0.26
DDX41-201ENST00000330503 PSMD11O00231 422 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 WNT9AO14904 365 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 NUAK1O60285 661 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 AP2A2O94973 939 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 PSMC3P17980 439 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 MSH3P20585 1137 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 GPX3P22352 226 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 GDF5P43026 501 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 CDC16Q13042 620 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 FASTKQ14296 549 aaKnown RBP16.64■□□□□ 0.25
DDX41-201ENST00000330503 E2F5Q15329 346 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 ZNF284Q2VY69 593 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 TCHHL1Q5QJ38 904 aaPredicted RBP16.64■□□□□ 0.25
DDX41-201ENST00000330503 PLEKHS1Q5SXH7 462 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 SCIMPQ6UWF3 145 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 RIPOR1Q6ZS17 1223 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 YAF2Q8IY57 180 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 BEND7Q8N7W2 519 aaPredicted RBP16.64■□□□□ 0.25
DDX41-201ENST00000330503 CDYL2Q8N8U2 506 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 UBTD2Q8WUN7 234 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 ASB11Q8WXH4 323 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 FGF14Q92915 247 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 GLYATL1Q969I3 302 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 ERLEC1Q96DZ1 483 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 EFCAB1Q9HAE3 211 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 CNOT6Q9ULM6 557 aaKnown RBP16.64■□□□□ 0.25
DDX41-201ENST00000330503 PDE10AQ9Y233 779 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 H0Y858 1186 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 CIB2O75838 187 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 KRT36O76013 467 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 PDE5AO76074 875 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 KAT7O95251 611 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 PRR35P0CG20 571 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 LAMP2P13473 410 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 CREB5Q02930 508 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 DLX2Q07687 328 aaPredicted RBP16.64■□□□□ 0.25
DDX41-201ENST00000330503 TBL3Q12788 808 aaKnown RBP16.64■□□□□ 0.25
DDX41-201ENST00000330503 XKR7Q5GH72 579 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 FBXL19Q6PCT2 694 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 PAOXQ6QHF9 649 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 FUNDC1Q8IVP5 155 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 RASGEF1AQ8N9B8 481 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 ELSPBP1Q96BH3 223 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 TUBGCP3Q96CW5 907 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 DTD2Q96FN9 168 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 NPAS2Q99743 824 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 EGFL8Q99944 293 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 DCLRE1BQ9H816 532 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 IPPKQ9H8X2 491 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 PRSS16Q9NQE7 514 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 MRGBPQ9NV56 204 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 LRRK1Q38SD2 2015 aa16.64■□□□□ 0.25
DDX41-201ENST00000330503 CFAP99D6REC4 459 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 H0Y3Z8 333 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 FBP2O00757 339 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 VPS4BO75351 444 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 PSMG1O95456 288 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 MPC1LP0DKB6 136 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 ADRB3P13945 408 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 LBPP18428 481 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 GNAZP19086 355 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 CTSCP53634 463 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 ACTR3P61158 418 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 TRAF3Q13114 568 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 ZXDCQ2QGD7 858 aaPredicted RBP16.63■□□□□ 0.25
DDX41-201ENST00000330503 TRMT5Q32P41 509 aaKnown RBP16.63■□□□□ 0.25
DDX41-201ENST00000330503 EGFLAMQ63HQ2 1017 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 EFL1Q7Z2Z2 1120 aaKnown RBP16.63■□□□□ 0.25
DDX41-201ENST00000330503 CYP2U1Q7Z449 544 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 MMAAQ8IVH4 418 aaKnown RBP16.63■□□□□ 0.25
DDX41-201ENST00000330503 OR4F6Q8NGB9 312 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 OR9I1Q8NGQ6 314 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 OR2T11Q8NH01 316 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 UCMAQ8WVF2 138 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 SUSD6Q92537 303 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 SLC12A9Q9BXP2 914 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 CCDC167Q9P0B6 97 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 OR2AG2A6NM03 316 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 SOD1P00441 154 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 LMNAP02545 664 aaKnown RBP16.63■□□□□ 0.25
DDX41-201ENST00000330503 HGFP14210 728 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 GDI1P31150 447 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 RPIAP49247 311 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 LDLRAP1Q5SW96 308 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 UBE2R2Q712K3 238 aaPredicted RBP16.63■□□□□ 0.25
DDX41-201ENST00000330503 HPS6Q86YV9 775 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 RASGRP3Q8IV61 690 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 FBXW8Q8N3Y1 598 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 CACNA2D2Q9NY47 1150 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 WWOXQ9NZC7 414 aa16.63■□□□□ 0.25
DDX41-201ENST00000330503 TMEM202A6NGA9 273 aa16.62■□□□□ 0.25
DDX41-201ENST00000330503 GFYI3L273 518 aa16.62■□□□□ 0.25
DDX41-201ENST00000330503 INPP4BO15327 924 aa16.62■□□□□ 0.25
DDX41-201ENST00000330503 MMP20O60882 483 aa16.62■□□□□ 0.25
DDX41-201ENST00000330503 KATNA1O75449 491 aa16.62■□□□□ 0.25
DDX41-201ENST00000330503 CAPN1P07384 714 aa16.62■□□□□ 0.25
DDX41-201ENST00000330503 DPP6P42658 865 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms