RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 KIAA1614Q5VZ46 1190 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SYVN1Q86TM6 617 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 HID1Q8IV36 788 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 FAM109AQ8N4B1 249 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 OR52K2Q8NGK3 314 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SPO11Q9Y5K1 396 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF407Q9C0G0 2248 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 LOC285556D6RIA3 1793 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CAMK2GQ13555 558 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 VEPH1Q14D04 833 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 KCNJ8Q15842 424 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 FAM98CQ17RN3 349 aaKnown RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SNAP47Q5SQN1 464 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ANXA8L1Q5VT79 327 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CYP20A1Q6UW02 462 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 C14orf80Q86SX3 495 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CYP2W1Q8TAV3 490 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CCDC107Q8WV48 283 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 LGMNQ99538 433 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 MMP19Q99542 508 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 MTFR1LQ9H019 292 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 FAM105AQ9NUU6 356 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 COPZ2Q9P299 210 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ENPP5Q9UJA9 477 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CAPN14A8MX76 684 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CXCR6O00574 342 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 C2P06681 752 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 RPS3P23396 243 aaKnown RBP eCLIP6.97□□□□□ -1.292e-7■□□□□ 9.5
SMC1A-201ENST00000322213 LHX1P48742 406 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CASP7P55210 303 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CCBE1Q6UXH8 406 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 NOXA1Q86UR1 476 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SPATA6LQ8N4H0 392 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 OR4A15Q8NGL6 344 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ADAM32Q8TC27 787 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 C15orf40Q8WUR7 153 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TMBIM1Q969X1 311 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CPB2Q96IY4 423 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SLC45A3Q96JT2 553 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TBATAQ96M53 351 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.97□□□□□ -1.291e-7■■■■■ 47.3
SMC1A-201ENST00000322213 CHRNA1P02708 482 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ITGB1P05556 798 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 BTG3Q14201 252 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CXorf57Q6NSI4 855 aaKnown RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 COMMD7Q86VX2 200 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ELMO1Q92556 727 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SDCBP2Q9H190 292 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 C11orf16Q9NQ32 467 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 BRCA1P38398 1863 aaKnown RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SLC15A5A6NIM6 579 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 A8MV72 311 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SOCS2O14508 198 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CHRNB2P17787 502 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 DGKAP23743 735 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CD86P42081 329 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ALDH7A1P49419 539 aaKnown RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TAS2R41P59536 307 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 CAMK1Q14012 370 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 GALNT3Q14435 633 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ATP13A4Q4VNC1 1196 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 PIK3R6Q5UE93 754 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TIGD4Q8IY51 512 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SLC4A11Q8NBS3 891 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SIMC1Q8NDZ2 872 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TRPM4Q8TD43 1214 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SNRNP25Q9BV90 132 aaKnown RBP6.97□□□□□ -1.29
SMC1A-201ENST00000322213 SEZ6LQ9BYH1 1024 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 PXMP2Q9NR77 195 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 ABCB8Q9NUT2 735 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 TRPC4Q9UBN4 977 aa6.97□□□□□ -1.29
SMC1A-201ENST00000322213 NFICP08651 508 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 SUPT20HL2P0C7V6 817 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 MZF1P28698 734 aaPredicted RBP6.96□□□□□ -1.29
SMC1A-201ENST00000322213 UBE2UQ5VVX9 321 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 LYPLAL1Q5VWZ2 237 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 ADNP2Q6IQ32 1131 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 ZDHHC21Q8IVQ6 265 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 PLD5Q8N7P1 536 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 BPIFB1Q8TDL5 484 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 POF1BQ8WVV4 589 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 BORCS6Q96GS4 357 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 C12orf66Q96MD2 445 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 CD93Q9NPY3 652 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.96□□□□□ -1.295e-7■■■□□ 16.5
SMC1A-201ENST00000322213 KLQ9UEF7 1012 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 HMGXB4Q9UGU5 601 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 DYRK1BQ9Y463 629 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 F5H5T6 163 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 TEX46H3BTG2 121 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 WWP2O00308 870 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 FOSL2P15408 326 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF7P17097 686 aaPredicted RBP6.96□□□□□ -1.29
SMC1A-201ENST00000322213 ADRA2BP18089 450 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 SLC6A4P31645 630 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 RORAP35398 523 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 CENPAP49450 140 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 GPX6P59796 221 aa6.96□□□□□ -1.29
SMC1A-201ENST00000322213 FAM174BQ3ZCQ3 159 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms