RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 FOXJ1Q92949 421 aa13.84□□□□□ -0.19
MSRA-201ENST00000317173 FUBP1Q96AE4 644 aaKnown RBP13.84□□□□□ -0.19
MSRA-201ENST00000317173 CCDC126Q96EE4 140 aa13.84□□□□□ -0.19
MSRA-201ENST00000317173 LINGO1Q96FE5 620 aa13.84□□□□□ -0.19
MSRA-201ENST00000317173 PAIP2Q9BPZ3 127 aaKnown RBP13.84□□□□□ -0.19
MSRA-201ENST00000317173 APOOQ9BUR5 198 aa13.84□□□□□ -0.19
MSRA-201ENST00000317173 GPR174Q9BXC1 333 aa13.84□□□□□ -0.19
MSRA-201ENST00000317173 C6orf106Q9H6K1 298 aaPredicted RBP13.84□□□□□ -0.19
MSRA-201ENST00000317173 MLXIPLQ9NP71 852 aa13.84□□□□□ -0.19
MSRA-201ENST00000317173 COPG2Q9UBF2 871 aa13.84□□□□□ -0.19
MSRA-201ENST00000317173 XPR1Q9UBH6 696 aa13.84□□□□□ -0.19
MSRA-201ENST00000317173 LIN7AO14910 233 aaPredicted RBP13.83□□□□□ -0.2
MSRA-201ENST00000317173 ZNF806P0C7X5 589 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 CPA3P15088 417 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 ZNF8P17098 575 aaPredicted RBP13.83□□□□□ -0.2
MSRA-201ENST00000317173 ITGB6P18564 788 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 TFEBP19484 476 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 TAC1P20366 129 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 GMPRP36959 345 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 MAPK9P45984 424 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 ID4P47928 161 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 PFN3P60673 137 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 GNGT1P63211 74 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 PLA2G2CQ5R387 149 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 ZNF648Q5T619 568 aaPredicted RBP13.83□□□□□ -0.2
MSRA-201ENST00000317173 LRRTM4Q86VH4 590 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 TRAPPC5Q8IUR0 188 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 TMEM151AQ8N4L1 468 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 TMEM145Q8NBT3 493 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 STAG3L4Q8TBR4 150 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 EEF1AKMT1Q8WVE0 214 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 ELMO1Q92556 727 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 GLMNQ92990 594 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 BIRC7Q96CA5 298 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 C12orf65Q9H3J6 166 aaKnown RBP13.83□□□□□ -0.2
MSRA-201ENST00000317173 SIRPGQ9P1W8 387 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 TMCO1Q9UM00 188 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 SLC17A4Q9Y2C5 497 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.83□□□□□ -0.2
MSRA-201ENST00000317173 OR1A2Q9Y585 309 aa13.83□□□□□ -0.2
MSRA-201ENST00000317173 A0A1W2PPC4 97 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 SYCE1LA8MT33 242 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 TK2O00142 265 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 KLF11O14901 512 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 ZBTB14O43829 449 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 KCNJ13O60928 360 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 KERAO60938 352 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 GPC4O75487 556 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 SLCO2B1O94956 709 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 FSBPO95073 299 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 MPC1LP0DKB6 136 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 MYL2P10916 166 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 HTR1BP28222 390 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 LSP1P33241 339 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 GLRBP48167 497 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 ASPHQ12797 758 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 NFATC4Q14934 902 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 PCLAFQ15004 111 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 ACSBG2Q5FVE4 666 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 ZYG11AQ6WRX3 759 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 ABI3BPQ7Z7G0 1075 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 ADAMTSL2Q86TH1 951 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 OXR1Q8N573 874 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 HM13Q8TCT9 377 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 LGR4Q9BXB1 951 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 FZD3Q9NPG1 666 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 PSD3Q9NYI0 1048 aa13.82□□□□□ -0.2
MSRA-201ENST00000317173 MBD1Q9UIS9 605 aaPredicted RBP13.82□□□□□ -0.2
MSRA-201ENST00000317173 CDV3Q9UKY7 258 aaKnown RBP13.82□□□□□ -0.2
MSRA-201ENST00000317173 SPTBN4Q9H254 2564 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 SLC5A10A0PJK1 596 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 MGAT4DA6NG13 374 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 METTL12A8MUP2 240 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 G3V2L1 256 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 KMOO15229 486 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 GRID2O43424 1007 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 H2AFYO75367 372 aaKnown RBP13.81□□□□□ -0.2
MSRA-201ENST00000317173 ATP5F1P24539 256 aaPredicted RBP13.81□□□□□ -0.2
MSRA-201ENST00000317173 RABIFP47224 123 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 DHPSP49366 369 aaPredicted RBP13.81□□□□□ -0.2
MSRA-201ENST00000317173 IRX4P78413 519 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 CBX1P83916 185 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 PPARDQ03181 441 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 HSPA14Q0VDF9 509 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 BOP1Q14137 746 aaKnown RBP13.81□□□□□ -0.2
MSRA-201ENST00000317173 PUM1Q14671 1186 aaKnown RBP eCLIP13.81□□□□□ -0.2
MSRA-201ENST00000317173 SYTL3Q4VX76 610 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 GCNT7Q6ZNI0 430 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 NUDCD3Q8IVD9 361 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 SLC22A9Q8IVM8 553 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 ZNF547Q8IVP9 402 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 SPATA6LQ8N4H0 392 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 OR2L2Q8NH16 312 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 NETO1Q8TDF5 533 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 LRRC8CQ8TDW0 803 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 NAT14Q8WUY8 206 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 TMEM159Q96B96 161 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 PTERQ96BW5 349 aa13.81□□□□□ -0.2
MSRA-201ENST00000317173 SCARF2Q96GP6 870 aaPredicted RBP13.81□□□□□ -0.2
MSRA-201ENST00000317173 BMFQ96LC9 184 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms