RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 RUNX3Q13761 415 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 CCNIQ14094 377 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 ZNF234Q14588 700 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 PFKFB4Q16877 469 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 Q6ZSR9 355 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 KBTBD6Q86V97 674 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.05□□□□□ -1.28
NPHP1-201ENST00000316534 DPP10Q8N608 796 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 GOLM1Q8NBJ4 401 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 NCSTNQ92542 709 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 MYADMQ96S97 322 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 CCDC68Q9H2F9 335 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 FBRSQ9HAH7 460 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 GPR34Q9UPC5 381 aa7.05□□□□□ -1.28
NPHP1-201ENST00000316534 ASPDHA6ND91 283 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 SHISA7A6NL88 538 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 IQCF5A8MTL0 148 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 IFRD1O00458 451 aaPredicted RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 LSM1O15116 133 aaKnown RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 RAD51BO15315 384 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 DCXO43602 365 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 DIAPH2O60879 1101 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 UGT1A6P19224 532 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 UGT1A1P22309 533 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 UGT1A4P22310 534 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 UGT1A3P35503 534 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 UGT1A5P35504 534 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 ELP6Q0PNE2 266 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 SF3A3Q12874 501 aaKnown RBP eCLIP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 RCAN2Q14206 197 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 TRIM68Q6AZZ1 485 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 C11orf96Q7Z7L8 435 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 MINDY1Q8N5J2 469 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 CYB5D2Q8WUJ1 264 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 ING5Q8WYH8 240 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 JADE3Q92613 823 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 UHRF1Q96T88 793 aaPredicted RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 FAM83DQ9H4H8 585 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PRSS16Q9NQE7 514 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 THG1LQ9NWX6 298 aaKnown RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 ZIM2Q9NZV7 527 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 DNMT3AQ9Y6K1 912 aaPredicted RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 UBA6A0AVT1 1052 aaPredicted RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 DYTNA2CJ06 578 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 GPR89AB7ZAQ6 455 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 H3BNX3 289 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 K7EQS6 105 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 LINC01565O15544 149 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 KIF1CO43896 1103 aaKnown RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 SLC4A1P02730 911 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 OR56A5P0C7T3 313 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 GPR89BP0CG08 455 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 LTBRP36941 435 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 GRIA2P42262 883 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PIK3CGP48736 1102 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 RGS4P49798 205 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 AGTR2P50052 363 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 AP1S2P56377 157 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 ZBTB16Q05516 673 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 DMPKQ09013 629 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 MAPRE2Q15555 327 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 TTLL9Q3SXZ7 439 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 CFAP157Q5JU67 520 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 RARS2Q5T160 578 aaKnown RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 LETMD1Q6P1Q0 360 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 BLOC1S3Q6QNY0 202 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 C16orf89Q6UX73 402 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 GDPD5Q8WTR4 605 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 GLYATL1Q969I3 302 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PHF21BQ96EK2 531 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 RILPQ96NA2 401 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 ACTL8Q9H568 366 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 SUCOQ9UBS9 1254 aaKnown RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PPT2Q9UMR5 302 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PDE10AQ9Y233 779 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 C15orf41Q9Y2V0 281 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 FADS3Q9Y5Q0 445 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 KLHL33A6NCF5 533 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PIP5K1BO14986 540 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 EEDO75530 441 aaKnown RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PSMG1O95456 288 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 C8BP07358 591 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 LAMP2P13473 410 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PRDX3P30048 256 aaKnown RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 DRD3P35462 400 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 TAS2R38P59533 333 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 EMX2Q04743 252 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 TRAP1Q12931 704 aaKnown RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 CYLC2Q14093 348 aaPredicted RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 CBX2Q14781 532 aaPredicted RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 TLR1Q15399 786 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PHKG1Q16816 387 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 RPS27LQ71UM5 84 aaKnown RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 MYO1HQ8N1T3 1032 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 C12orf76Q8N812 135 aaPredicted RBP7.04□□□□□ -1.28
NPHP1-201ENST00000316534 PARVBQ9HBI1 364 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 CYP4F12Q9HCS2 524 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 CACNA2D2Q9NY47 1150 aa7.04□□□□□ -1.28
NPHP1-201ENST00000316534 TNRC18O15417 2968 aaPredicted RBP7.03□□□□□ -1.28
NPHP1-201ENST00000316534 E9PBE3 544 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms