RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 GPAT2Q6NUI2 795 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 LRFN4Q6PJG9 635 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TMEM270Q6UE05 265 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 NSMFQ6X4W1 530 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TMEM135Q86UB9 458 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 RETREG3Q86VR2 466 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 RHPN2Q8IUC4 686 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TCTE3Q8IZS6 198 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TBC1D19Q8N5T2 526 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 OR8H1Q8NGG4 311 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 DNAJA4Q8WW22 397 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 MYDGFQ969H8 173 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 RAD51AP1Q96B01 352 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PAWRQ96IZ0 340 aaKnown RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SH2D3AQ9BRG2 576 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 BEX2Q9BXY8 128 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ASPSCR1Q9BZE9 553 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 RACGAP1Q9H0H5 632 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PNPOQ9NVS9 261 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 NUFIP1Q9UHK0 495 aaKnown RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ACSL5Q9ULC5 683 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TLR6Q9Y2C9 796 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 KLHL20Q9Y2M5 609 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ZBTB42B2RXF5 422 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TARM1B6A8C7 271 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SGK1O00141 431 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 CHMP2AO43633 222 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 CST8O60676 142 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SUPT7LO94864 414 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PSMA2P25787 234 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 MIPP30301 263 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 GPC1P35052 558 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 RPS5P46782 204 aaKnown RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 POU3F4P49335 361 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 GP2P55259 537 aaKnown RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 NRG1Q02297 640 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 EN1Q05925 392 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PTPN11Q06124 597 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SLC10A2Q12908 348 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 IKZF1Q13422 519 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 BAATQ14032 418 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF169Q14929 603 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ATP6AP1Q15904 470 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 BCL7AQ4VC05 210 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 LDLRAD1Q5T700 205 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 RAP1GAP2Q684P5 730 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 KCTD11Q693B1 232 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 BTN2A1Q7KYR7 527 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 MAMDC2Q7Z304 686 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ZBTB33Q86T24 672 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 KIAA0319LQ8IZA0 1049 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 FAM71DQ8N9W8 422 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 BLOC1S5Q8TDH9 187 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 KCTD13Q8WZ19 329 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SERPINB11Q96P15 392 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 C19orf43Q9BQ61 176 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SPATA9Q9BWV2 254 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PCDHAC1Q9H158 963 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 RNF39Q9H2S5 420 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF302Q9NR11 478 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SMPD3Q9NY59 655 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ADA2Q9NZK5 511 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SRRDQ9UH36 339 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TRPS1Q9UHF7 1281 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PCDHGA9Q9Y5G4 932 aaKnown RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TNPO3Q9Y5L0 923 aaKnown RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 FRMPD3Q5JV73 1810 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 A0A0A0MRY4 1105 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 FAM92AA1XBS5 289 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PMS2P1A4D2B8 440 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 NT5C1B-RDH14C9J2C7 533 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PIK3R2O00459 728 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 NRP1O14786 923 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 RASAL1O95294 804 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 WISP3O95389 354 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 CHRNA1P02708 482 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 NFKB2Q00653 900 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ACY1Q03154 408 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 CDH17Q12864 832 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 KCNC3Q14003 757 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 GRIK4Q16099 956 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 FASTKD1Q53R41 847 aaKnown RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 C2CD6Q53TS8 623 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 RBM48Q5RL73 367 aaKnown RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 FAM45BPQ6NSW5 357 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 C5orf46Q6UWT4 87 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TFAP2EQ6VUC0 442 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 CATSPERGQ6ZRH7 1159 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 GPR142Q7Z601 462 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 NECAB2Q7Z6G3 386 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SLC51AQ86UW1 340 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 IGDCC3Q8IVU1 814 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 OR8H3Q8N146 312 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PELI3Q8N2H9 469 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PARP16Q8N5Y8 322 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SMG8Q8ND04 991 aaKnown RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 FAM45AQ8TCE6 357 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TFAP2BQ92481 460 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PTERQ96BW5 349 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TMEM68Q96MH6 324 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms