RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GSTM3P21266 225 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 GADD45AP24522 165 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 INHBEP58166 350 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 VSTM1Q6UX27 236 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 GALNT13Q8IUC8 556 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 DENND1AQ8TEH3 1009 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 EZH1Q92800 747 aaPredicted RBP15.29■□□□□ 0.04
HCFC1-201ENST00000310441 UNC93B1Q9H1C4 597 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 HMX1Q9NP08 348 aaPredicted RBP15.29■□□□□ 0.04
HCFC1-201ENST00000310441 PCDHB9Q9Y5E1 797 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 OR6C75A6NL08 312 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 A8MX80 341 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 M0QX08 132 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 GTF2H2Q13888 395 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 GTF2H2CQ6P1K8 395 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 HSDL2Q6YN16 418 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 OR4C15Q8NGM1 316 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 TWIST2Q8WVJ9 160 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 KAT8Q9H7Z6 458 aaKnown RBP15.29■□□□□ 0.04
HCFC1-201ENST00000310441 TIMM13Q9Y5L4 95 aaPredicted RBP15.29■□□□□ 0.04
HCFC1-201ENST00000310441 TTC34A8MYJ7 566 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 ENTPD6O75354 484 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 SHBGP04278 402 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 CASRP41180 1078 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 CYP4F8P98187 520 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 COQ8BQ96D53 544 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 GDAP2Q9NXN4 497 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 DUXAA6NLW8 204 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 ALOX15BO15296 676 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 RAB36O95755 333 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 PGAM2P15259 253 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 CCKBRP32239 447 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 GPR158Q5T848 1215 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 TBATAQ96M53 351 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 TRPV4Q9HBA0 871 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 IMP3Q9NV31 184 aaKnown RBP15.29■□□□□ 0.04
HCFC1-201ENST00000310441 DNAJA1P31689 397 aaKnown RBP15.29■□□□□ 0.04
HCFC1-201ENST00000310441 MRPS5P82675 430 aaKnown RBP15.29■□□□□ 0.04
HCFC1-201ENST00000310441 LDLRAP1Q5SW96 308 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 WSCD1Q658N2 575 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 OXR1Q8N573 874 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 AZIN2Q96A70 460 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 FETUBQ9UGM5 382 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 IL7RP16871 459 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 ACADVLP49748 655 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 CRYBG2Q8N1P7 616 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 COX18Q8N8Q8 333 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 SPERTQ8NA61 448 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 AGO3Q9H9G7 860 aaKnown RBP15.28■□□□□ 0.04
HCFC1-201ENST00000310441 B3GAT2Q9NPZ5 323 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 CYP3A7-CYP3A51PA0A087WV96 503 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 CYP3A7P24462 503 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 RPL26P61254 145 aaKnown RBP15.28■□□□□ 0.04
HCFC1-201ENST00000310441 CRADDP78560 199 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 PCDH1Q08174 1060 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 ZFPM1Q8IX07 1006 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 ATAD1Q8NBU5 361 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 KCTD4Q8WVF5 259 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 PPM1MQ96MI6 270 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 NUDT15Q9NV35 164 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 PDPK1O15530 556 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 PRNPP04156 253 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 PON3Q15166 354 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 AMIGO2Q86SJ2 522 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 SLC44A1Q8WWI5 657 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 SMURF1Q9HCE7 757 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 H6PDO95479 791 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 DUPD1Q68J44 220 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 MSANTD2Q6P1R3 559 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 C16orf58Q96GQ5 468 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 NUSAP1Q9BXS6 441 aaKnown RBP15.28■□□□□ 0.04
HCFC1-201ENST00000310441 MAP4K5Q9Y4K4 846 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 B3GALT2O43825 422 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 HMGN1P05114 100 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 CCNCP24863 283 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 CAV3P56539 151 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF782Q6ZMW2 699 aaPredicted RBP15.28■□□□□ 0.04
HCFC1-201ENST00000310441 PDCD2LQ9BRP1 358 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 IDI2Q9BXS1 227 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 U3KQV3 271 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 KDM4BO94953 1096 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 DEFA5Q01523 94 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 SLC10A7Q0GE19 358 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.28■□□□□ 0.045e-7■□□□□ 8.1
HCFC1-201ENST00000310441 RAP1GAP2Q684P5 730 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 CORO1BQ9BR76 489 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 COPS4Q9BT78 406 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 ABCB9Q9NP78 766 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 A0A0J9YVX5 310 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 A0A1B0GVM2 712 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 TCAF2A6NFQ2 919 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 APODP05090 189 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 IDSP22304 550 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 CA9Q16790 459 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 ABHD13Q7L211 337 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 ZC3HC1Q86WB0 502 aaKnown RBP15.28■□□□□ 0.04
HCFC1-201ENST00000310441 TRIM36Q9NQ86 728 aa15.28■□□□□ 0.04
HCFC1-201ENST00000310441 PDHXO00330 501 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 EDF1O60869 148 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms