RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FSCN2O14926 492 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 OTCP00480 354 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 BUD31P41223 144 aaPredicted RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 GPR1P46091 355 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 MAPK12P53778 367 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 NRLP54845 237 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 AP3S2P59780 193 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 DCDC1P59894 354 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 CTBP1Q13363 440 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 LRRC38Q5VT99 294 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 ANKRD33Q7Z3H0 272 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 SPATA19Q7Z5L4 167 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 CPSF7Q8N684 471 aaKnown RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 ZNF433Q8N7K0 673 aaPredicted RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 FAM98AQ8NCA5 519 aaKnown RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 PNPT1Q8TCS8 783 aaKnown RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 C7orf26Q96N11 449 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 ACSS2Q9NR19 701 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 ARHGEF4Q9NR80 690 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 DNAJC11Q9NVH1 559 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 HPF1Q9NWY4 346 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 IFT80Q9P2H3 777 aaPredicted RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 MALT1Q9UDY8 824 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 BRWD3Q6RI45 1802 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 EFCAB9A8MZ26 197 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 PLOD2O00469 737 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 CD86P42081 329 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 SLC11A1P49279 550 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 AP2S1P53680 142 aaPredicted RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 TAS2R41P59536 307 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 C1orf189Q5VU69 101 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 TXNDC11Q6PKC3 985 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 ASB12Q8WXK4 309 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 ST6GALNAC4Q9H4F1 302 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 INTS7Q9NVH2 962 aaKnown RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 MAT2BQ9NZL9 334 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 TMEM265A0A087WTH1 108 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 FABP3P05413 133 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 CDH4P55283 916 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 EIF2S3LQ2VIR3 472 aaKnown RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 RBM20Q5T481 1227 aaKnown RBP8.09□□□□□ -1.11
VPS41-202ENST00000310301 KCNK18Q7Z418 384 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 OAFQ86UD1 273 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 FAM35AQ86V20 835 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 SLC9A9Q8IVB4 645 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 ANKRD52Q8NB46 1076 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 BPIFB1Q8TDL5 484 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 RAD51AP1Q96B01 352 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 SUSD3Q96L08 255 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 PPM1MQ96MI6 270 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 RNF157Q96PX1 679 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 SLC22A4Q9H015 551 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 MUC13Q9H3R2 512 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 PRDM16Q9HAZ2 1276 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 SUSD2Q9UGT4 822 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 VPS51Q9UID3 782 aa8.09□□□□□ -1.11
VPS41-202ENST00000310301 A0A1W2PPC1 479 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 GRM6O15303 877 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 HOXB6P17509 224 aaKnown RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 CLCNKBP51801 687 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 POLR2JP52435 117 aaKnown RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 FUT2Q10981 343 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 WDR45BQ5MNZ6 344 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 MPP5Q8N3R9 675 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 TTC29Q8NA56 475 aaPredicted RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 KLHDC9Q8NEP7 349 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ULBP1Q9BZM6 244 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 POLR1EQ9GZS1 481 aaKnown RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 RHBGQ9H310 441 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 AASSQ9UDR5 926 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ZNHIT2Q9UHR6 403 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 TMED5Q9Y3A6 229 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 LRRC14BA6NHZ5 514 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ANKRD63C9JTQ0 380 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 AGPSO00116 658 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SLC28A2O43868 658 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ADAMTS4O75173 837 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ASLP04424 464 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 S100GP29377 79 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 PRDX6P30041 224 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 CDH13P55290 713 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ZNF234Q14588 700 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 VPS26BQ4G0F5 336 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 DET1Q7L5Y6 550 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ZNF607Q96SK3 696 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 HERC2P3Q9BVR0 1158 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 PAK6Q9NQU5 681 aaPredicted RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 FLRT1Q9NZU1 646 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 FBXO9Q9UK97 447 aaPredicted RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 MGAT4AQ9UM21 535 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 USP20Q9Y2K6 914 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 MYADML2A6NDP7 307 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 TEX46H3BTG2 121 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 PLIN3O60664 434 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SERPINB7O75635 380 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 UGT2B17O75795 530 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 IFNA16P05015 189 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 NPR2P20594 1047 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 BMP6P22004 513 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SERPINA4P29622 427 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms