RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 A0A0B4J203 849 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 A0A1W2PQ72 361 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 CCDC162PA2VCL2 907 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 C2orf78A6NCI8 922 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 GSTA4O15217 222 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 CFLARO15519 480 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 PCDH8O95206 1070 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 IMPDH1P20839 514 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DRD1P21728 446 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TARSP26639 723 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 MZF1P28698 734 aaPredicted RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 OXTRP30559 389 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 LCP2Q13094 533 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 KIAA1161Q6NSJ0 714 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ARMC6Q6NXE6 501 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ZFP1Q6P2D0 407 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 FIP1L1Q6UN15 594 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 UNC5DQ6UXZ4 953 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 GPR149Q86SP6 731 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 PRPF39Q86UA1 669 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 GALNT4Q8N4A0 578 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SHKBP1Q8TBC3 707 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TSPEARQ8WU66 669 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SNX19Q92543 992 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 KIAA1191Q96A73 305 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 NRBF2Q96F24 287 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DNAJC1Q96KC8 554 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 NELL2Q99435 816 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 HERPUD2Q9BSE4 406 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 NLNQ9BYT8 704 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TMEM245Q9H330 911 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SCPEP1Q9HB40 452 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TIMMDC1Q9NPL8 285 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TREX1Q9NSU2 369 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DNAJC11Q9NVH1 559 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 POLR3BQ9NW08 1133 aaPredicted RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 XPR1Q9UBH6 696 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 FCF1Q9Y324 198 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 WDR81Q562E7 1941 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SMIM31A0A1B0GVY4 71 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 PIPSLA2A3N6 862 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 CCDC78A2IDD5 438 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 SYNDIG1LA6NDD5 238 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 ECI2O75521 394 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 UGT2B4P06133 528 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 FCGR1AP12314 374 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 PPIBP23284 216 aaKnown RBP5.91□□□□□ -1.46
SEC22A-201ENST00000309934 CD68P34810 354 aaPredicted RBP5.91□□□□□ -1.46
SEC22A-201ENST00000309934 HPCAP84074 193 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 GPRIN3Q6ZVF9 776 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 MILR1Q7Z6M3 343 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 SERPINA9Q86WD7 417 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 MIER2Q8N344 545 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 ZNF655Q8N720 491 aaPredicted RBP5.91□□□□□ -1.46
SEC22A-201ENST00000309934 GLIS1Q8NBF1 620 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 AUTS2Q8WXX7 1259 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 ELMO1Q92556 727 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 DNASE1L2Q92874 299 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 SCRN2Q96FV2 425 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 HGH1Q9BTY7 390 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 ZNF717Q9BY31 904 aaPredicted RBP5.91□□□□□ -1.46
SEC22A-201ENST00000309934 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.91□□□□□ -1.46
SEC22A-201ENST00000309934 TRIM8Q9BZR9 551 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 CXCL16Q9H2A7 254 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 ELOVL6Q9H5J4 265 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 EBF2Q9HAK2 575 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 TBCCD1Q9NVR7 557 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 SIRPGQ9P1W8 387 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 A0A1W2PPM1 405 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 WASH3PC4AMC7 463 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 TK2O00142 265 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 AZIN1O14977 448 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 YKT6O15498 198 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 BMP10O95393 424 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 PIGNO95427 931 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 UROSP10746 265 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 CLUP10909 449 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 HRH2P25021 359 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 ERFP50548 548 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 ACVR1Q04771 509 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 KDSRQ06136 332 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 GRIK2Q13002 908 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 RUNX3Q13761 415 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 COTL1Q14019 142 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 CTC1Q2NKJ3 1217 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 CNPY1Q3B7I2 92 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 MSS51Q4VC12 460 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 LIN52Q52LA3 116 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 DGKKQ5KSL6 1271 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 LY6G5CQ5SRR4 150 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 BHLHA9Q7RTU4 235 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 HDDC2Q7Z4H3 204 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 CNTD1Q8N815 330 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 PTGR2Q8N8N7 351 aaPredicted RBP5.91□□□□□ -1.46
SEC22A-201ENST00000309934 LRRC20Q8TCA0 184 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 ACTRT2Q8TDY3 377 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 ELSPBP1Q96BH3 223 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 AP2M1Q96CW1 435 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 LINGO1Q96FE5 620 aa5.91□□□□□ -1.46
SEC22A-201ENST00000309934 PDLIM5Q96HC4 596 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms