RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLC15A3Q8IY34 581 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 ARL14EPQ8N8R7 260 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-201ENST00000309428 TRPV3Q8NET8 790 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 OR2T12Q8NG77 320 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 KIFC1Q9BW19 673 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 SLC25A51Q9H1U9 297 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 RPF2Q9H7B2 306 aaKnown RBP12.49□□□□□ -0.41
RETREG3-201ENST00000309428 PRSS51A0A1B0GVH4 220 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 HTR3EA5X5Y0 456 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 FGF10O15520 208 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-201ENST00000309428 SBK3P0C264 359 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 SLC11A1P49279 550 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 SGSHP51688 502 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 BNIP2Q12982 314 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 CPSF6Q16630 551 aaKnown RBP eCLIP12.49□□□□□ -0.41
RETREG3-201ENST00000309428 MAPKAPK3Q16644 382 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 TAGAPQ8N103 731 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 PGBD5Q8N414 524 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 STX19Q8N4C7 294 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.49□□□□□ -0.41
RETREG3-201ENST00000309428 MYOCQ99972 504 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 NUAK2Q9H093 628 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 LTB4R2Q9NPC1 389 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 MRGBPQ9NV56 204 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 hCG_2039718K7EN88 272 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 NDUFS2O75306 463 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 NR4A2P43354 598 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 MAP2K4P45985 399 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 SLC11A2P49281 568 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 OR4D1Q15615 310 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 SPANXN2Q5MJ10 180 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 FUT10Q6P4F1 479 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 CHERPQ8IWX8 916 aaKnown RBP12.49□□□□□ -0.41
RETREG3-201ENST00000309428 SLC22A15Q8IZD6 547 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 OMA1Q96E52 524 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 HOPXQ9BPY8 73 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-201ENST00000309428 EHD1Q9H4M9 534 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 PARVBQ9HBI1 364 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 INTS7Q9NVH2 962 aaKnown RBP12.49□□□□□ -0.41
RETREG3-201ENST00000309428 C3orf18Q9UK00 162 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 WDR37Q9Y2I8 494 aa12.49□□□□□ -0.41
RETREG3-201ENST00000309428 C2orf81A6NN90 581 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 EVPLLA8MZ36 301 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 ANXA6P08133 673 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 TCEA1P23193 301 aaKnown RBP12.48□□□□□ -0.41
RETREG3-201ENST00000309428 IL12AP29459 219 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 GRK3P35626 688 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 MAGEA6P43360 314 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 SH3BP2P78314 561 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 HMGCS1Q01581 520 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 MOGQ16653 247 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 UGT3A1Q6NUS8 523 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 TMEM207Q6UWW9 146 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 NECAB2Q7Z6G3 386 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 CILP2Q8IUL8 1156 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 TTC30BQ8N4P2 665 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 TET1Q8NFU7 2136 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 PROX1Q92786 737 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 DEFB118Q96PH6 123 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 TSSK3Q96PN8 268 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 CHCHD6Q9BRQ6 235 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 ACTR8Q9H981 624 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 SLAMF8Q9P0V8 285 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 AGO1Q9UL18 857 aaKnown RBP12.48□□□□□ -0.41
RETREG3-201ENST00000309428 MZF1P28698 734 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-201ENST00000309428 GTF2E2P29084 291 aaKnown RBP12.48□□□□□ -0.41
RETREG3-201ENST00000309428 HSPA7P48741 367 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 POLR2JP52435 117 aaKnown RBP12.48□□□□□ -0.41
RETREG3-201ENST00000309428 IHHQ14623 411 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 KCTD11Q693B1 232 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 PSAPL1Q6NUJ1 521 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 C17orf99Q6UX52 265 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 ZNF621Q6ZSS3 439 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 IGFN1Q86VF2 1251 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 TMEM102Q8N9M5 508 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-201ENST00000309428 LMNTD1Q8N9Z9 388 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 CNIH3Q8TBE1 160 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 RAB2BQ8WUD1 216 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 NT5C3BQ969T7 300 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 SUSD3Q96L08 255 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 TMEM161AQ9NX61 479 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 TAS2R13Q9NYV9 303 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 CRLS1Q9UJA2 301 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 PRKAB1Q9Y478 270 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 RAI2Q9Y5P3 530 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 HAS3O00219 553 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 NBNO60934 754 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 IL1BP01584 269 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 RCVRNP35243 200 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 CYP4F8P98187 520 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 PIANPQ8IYJ0 282 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 OR13J1Q8NGT2 312 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 EEF1AKMT1Q8WVE0 214 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 NCSTNQ92542 709 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 SGCDQ92629 289 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 BIRC7Q96CA5 298 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 MTERF3Q96E29 417 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 AURKBQ96GD4 344 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-201ENST00000309428 SMOC2Q9H3U7 446 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 POLR3BQ9NW08 1133 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms