RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 ABCG8Q9H221 673 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 EPB41L1Q9H4G0 881 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 PCDHA9Q9Y5H5 950 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 INSL5Q9Y5Q6 135 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 ABLIM3O94929 683 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 CD160O95971 181 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 TRBC1P01850 177 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 LRG1P02750 347 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 TCTN1Q2MV58 587 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.26
CDH8-201ENST00000299345 ADGRG5Q8IZF4 528 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 FIBCD1Q8N539 461 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 ITFG1Q8TB96 612 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 ARL15Q9NXU5 204 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 PTTG2Q9NZH5 202 aa13.4□□□□□ -0.26
CDH8-201ENST00000299345 KIAA1522Q9P206 1035 aaPredicted RBP13.4□□□□□ -0.26
CDH8-201ENST00000299345 CLGNO14967 610 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 KCNH1O95259 989 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 ENO2P09104 434 aaPredicted RBP13.39□□□□□ -0.27
CDH8-201ENST00000299345 HNF1BP35680 557 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 PCBP2Q15366 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDH8-201ENST00000299345 CRY1Q16526 586 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 MAPKAPK3Q16644 382 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 CLEC4FQ8N1N0 589 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 TNIP2Q8NFZ5 429 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 FAM110BQ8TC76 370 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 PROKR1Q8TCW9 393 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 FIG4Q92562 907 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 MTFMTQ96DP5 389 aaKnown RBP13.39□□□□□ -0.27
CDH8-201ENST00000299345 BRINP2Q9C0B6 783 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 P2RY12Q9H244 342 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 IL26Q9NPH9 171 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 MAGEL2Q9UJ55 1249 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 RNF11Q9Y3C5 154 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 TRIM17Q9Y577 477 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 PATJQ8NI35 1801 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 EI24O14681 340 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 DEAF1O75398 565 aaPredicted RBP13.39□□□□□ -0.27
CDH8-201ENST00000299345 ALBP02768 609 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 MERTKQ12866 999 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 ABRAXAS2Q15018 415 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 ZFAND4Q86XD8 727 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 ZFP28Q8NHY6 868 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 WFDC5Q8TCV5 224 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 PIH1D2Q8WWB5 315 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 PDLIM5Q96HC4 596 aaKnown RBP13.39□□□□□ -0.27
CDH8-201ENST00000299345 CHID1Q9BWS9 393 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 SPG21Q9NZD8 308 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 SLC8A2Q9UPR5 921 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 A0A087WXM4 84 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 SLC28A1O00337 649 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 LATS1O95835 1130 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 GNRH1P01148 92 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 KRT6AP02538 564 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 KRT6BP04259 564 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 ANXA5P08758 320 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 EEF1B2P24534 225 aaKnown RBP13.39□□□□□ -0.27
CDH8-201ENST00000299345 KRT6CP48668 564 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 SNRPD1P62314 119 aaKnown RBP13.39□□□□□ -0.27
CDH8-201ENST00000299345 HMGCS1Q01581 520 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 HSPA14Q0VDF9 509 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 CPSF6Q16630 551 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDH8-201ENST00000299345 FAM98BQ52LJ0 330 aaKnown RBP13.39□□□□□ -0.27
CDH8-201ENST00000299345 MPPE1Q53F39 396 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 SULT1C3Q6IMI6 304 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 LPCAT2Q7L5N7 544 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 KIAA2013Q8IYS2 634 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 COPS8Q99627 209 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 CGREF1Q99674 301 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 AGPAT4Q9NRZ5 378 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 PKD2L2Q9NZM6 624 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 ZNF490Q9ULM2 529 aaPredicted RBP13.39□□□□□ -0.27
CDH8-201ENST00000299345 PADI4Q9UM07 663 aa13.39□□□□□ -0.27
CDH8-201ENST00000299345 NPPAP01160 153 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 PRR35P0CG20 571 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 RECQLP46063 649 aaPredicted RBP13.38□□□□□ -0.27
CDH8-201ENST00000299345 GNPDA1P46926 289 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 LSAMPQ13449 338 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 GPR33Q49SQ1 333 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 INTS11Q5TA45 600 aaKnown RBP13.38□□□□□ -0.27
CDH8-201ENST00000299345 SBSNQ6UWP8 590 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
CDH8-201ENST00000299345 BIRC7Q96CA5 298 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 ING2Q9H160 280 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 FAM8A1Q9UBU6 413 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 FADS3Q9Y5Q0 445 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 H3BSA7 217 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 STK16O75716 305 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 PCNAP12004 261 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 CDH15P55291 814 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 CREB5Q02930 508 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 RFTN2Q52LD8 501 aaPredicted RBP13.38□□□□□ -0.27
CDH8-201ENST00000299345 USP45Q70EL2 814 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 METTL3Q86U44 580 aaKnown RBP13.38□□□□□ -0.27
CDH8-201ENST00000299345 CARM1Q86X55 608 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 ELMOD1Q8N336 334 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 METTL25Q8N6Q8 603 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 VN1R3Q9BXE9 311 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 ANKRD60Q9BZ19 345 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 PARVBQ9HBI1 364 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms