RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 BBS2Q9BXC9 721 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 SLC25A51Q9H1U9 297 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF221Q9UK13 617 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 ANKRD31Q8N7Z5 1873 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF638Q14966 1978 aaKnown RBP11.25□□□□□ -0.61
TRUB1-201ENST00000298746 MLYCDO95822 493 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 ITIH1P19827 911 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 DMC1Q14565 340 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 PTGR1Q14914 329 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 DPY19L1Q2PZI1 675 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF404Q494X3 552 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 ZRANB3Q5FWF4 1079 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 CCBE1Q6UXH8 406 aaPredicted RBP11.25□□□□□ -0.61
TRUB1-201ENST00000298746 ANKRD46Q86W74 232 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 PTRH1Q86Y79 214 aaKnown RBP11.25□□□□□ -0.61
TRUB1-201ENST00000298746 MMAAQ8IVH4 418 aaKnown RBP11.25□□□□□ -0.61
TRUB1-201ENST00000298746 MTFMTQ96DP5 389 aaKnown RBP11.25□□□□□ -0.61
TRUB1-201ENST00000298746 SMARCD1Q96GM5 515 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 KLHL3Q9UH77 587 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 INTS6Q9UL03 887 aaKnown RBP11.25□□□□□ -0.61
TRUB1-201ENST00000298746 UTRNP46939 3433 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 TRIM64A6NGJ6 449 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 hCG_2039718K7EN88 272 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 HTR1AP08908 422 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 VGLL4Q14135 290 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 SPATC1Q76KD6 591 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 OR52B6Q8NGF0 335 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 PROKR1Q8TCW9 393 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 KCTD13Q8WZ19 329 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 RHNO1Q9BSD3 238 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 OSBPL10Q9BXB5 764 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 IL37Q9NZH6 218 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 SLCO3A1Q9UIG8 710 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 GJD2Q9UKL4 321 aa11.25□□□□□ -0.61
TRUB1-201ENST00000298746 EIF3LQ9Y262 564 aaKnown RBP11.25□□□□□ -0.61
TRUB1-201ENST00000298746 CENPXA8MT69 81 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 NUAK1O60285 661 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 SEC22BO75396 215 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 VPS26AO75436 327 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 MYCLP1P12525 358 aaPredicted RBP11.24□□□□□ -0.61
TRUB1-201ENST00000298746 HNRNPFP52597 415 aaKnown RBP11.24□□□□□ -0.61
TRUB1-201ENST00000298746 SIRPB2Q5JXA9 342 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 TXNDC11Q6PKC3 985 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 MIB1Q86YT6 1006 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 SVOPLQ8N434 492 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 PIK3C3Q8NEB9 887 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 OR5K1Q8NHB7 308 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 PSMG2Q969U7 264 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 FKBP10Q96AY3 582 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF419Q96HQ0 510 aaPredicted RBP11.24□□□□□ -0.61
TRUB1-201ENST00000298746 CAMKK2Q96RR4 588 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 TRIT1Q9H3H1 467 aaKnown RBP11.24□□□□□ -0.61
TRUB1-201ENST00000298746 ZBTB20Q9HC78 741 aaPredicted RBP11.24□□□□□ -0.61
TRUB1-201ENST00000298746 MOV10Q9HCE1 1003 aaKnown RBP11.24□□□□□ -0.61
TRUB1-201ENST00000298746 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 VAPAQ9P0L0 249 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 BTBD3Q9Y2F9 522 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 ASPDHA6ND91 283 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 GUCY1B2O75343 617 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 DCTP40126 519 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 IDH2P48735 452 aaKnown RBP11.24□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF135P52742 658 aaPredicted RBP11.24□□□□□ -0.61
TRUB1-201ENST00000298746 MADCAM1Q13477 382 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 DDR2Q16832 855 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 COQ5Q5HYK3 327 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 TPRG1LQ5T0D9 272 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 VASH1Q7L8A9 365 aaPredicted RBP11.24□□□□□ -0.61
TRUB1-201ENST00000298746 NECAB2Q7Z6G3 386 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 ARHGAP12Q8IWW6 846 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 TOP6BLQ8N6T0 577 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 RHOXF1Q8NHV9 184 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 OR52E6Q96RD3 313 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 CHCHD6Q9BRQ6 235 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 ALOXE3Q9BYJ1 711 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 MFSD1Q9H3U5 465 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 SMOC2Q9H3U7 446 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 EHD3Q9NZN3 535 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 MGAMO43451 1857 aa11.24□□□□□ -0.61
TRUB1-201ENST00000298746 FGF10O15520 208 aaPredicted RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 DYRK3O43781 588 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 SLC25A27O95847 323 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 HTR6P50406 440 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 GABARAPL2P60520 117 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ZFP69Q49AA0 526 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ARMC4Q5T2S8 1044 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 STEAP3Q658P3 488 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 BEND5Q7L4P6 421 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 DPP9Q86TI2 863 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 METTL23Q86XA0 190 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 HIPK1Q86Z02 1210 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 LRRC49Q8IUZ0 686 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 ZDHHC21Q8IVQ6 265 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 FAM83FQ8NEG4 500 aaPredicted RBP11.23□□□□□ -0.61
TRUB1-201ENST00000298746 SLC13A3Q8WWT9 602 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 MYLPFQ96A32 169 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 LINGO1Q96FE5 620 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 HMCESQ96FZ2 354 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 EXOC2Q96KP1 924 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 TSGA13Q96PP4 275 aa11.23□□□□□ -0.61
TRUB1-201ENST00000298746 TFB2MQ9H5Q4 396 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms