RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TTC34A8MYJ7 566 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ABLIM3O94929 683 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 CD160O95971 181 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 FGBP02675 491 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 UQCRBP14927 111 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 EPCAMP16422 314 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 EPB42P16452 691 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 HMGCLP35914 325 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 SPAM1P38567 509 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 CCR2P41597 374 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 MRPL19P49406 292 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 PPM1FP49593 454 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 POLR2JP52435 117 aaKnown RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ABRAXAS2Q15018 415 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 TTLL9Q3SXZ7 439 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 RFTN2Q52LD8 501 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 IRAK1BP1Q5VVH5 260 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 NAIF1Q69YI7 327 aaPredicted RBP9.16□□□□□ -0.94
PRDM9-201ENST00000296682 FUNDC1Q8IVP5 155 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 LILRA2Q8N149 483 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 ZBTB2Q8N680 514 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 PLEKHG4BQ96PX9 1271 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 TRIB3Q96RU7 358 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 DERL2Q9GZP9 239 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 RIMKLBQ9ULI2 386 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 VPS4AQ9UN37 437 aa9.16□□□□□ -0.94
PRDM9-201ENST00000296682 CNTRLQ7Z7A1 2325 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 WASH3PC4AMC7 463 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 OR6B1O95007 311 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 MLYCDO95822 493 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 ATP6V1B2P21281 511 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 PSMA4P25789 261 aaKnown RBP9.15□□□□□ -0.94
PRDM9-201ENST00000296682 ETV3P41162 512 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 PREPP48147 710 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 LIPEQ05469 1076 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 GALNT1Q10472 559 aaPredicted RBP9.15□□□□□ -0.94
PRDM9-201ENST00000296682 PLCL1Q15111 1095 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 PAGE3Q5JUK9 113 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 TMTC4Q5T4D3 741 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 LARP4Q71RC2 724 aaKnown RBP eCLIP9.15□□□□□ -0.94
PRDM9-201ENST00000296682 GOLGA7Q7Z5G4 137 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 TMEM150AQ86TG1 271 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 ADAMTSL2Q86TH1 951 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 KBTBD6Q86V97 674 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 CLEC4FQ8N1N0 589 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 DCAF4L2Q8NA75 395 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 BADQ92934 168 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 PEX13Q92968 403 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 TCF12Q99081 682 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 TRIM4Q9C037 500 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 MEAF6Q9HAF1 191 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 SLC22A14Q9Y267 594 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 MAP3K13O43283 966 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 LZTS3O60299 673 aaPredicted RBP9.15□□□□□ -0.94
PRDM9-201ENST00000296682 ESRRBO95718 433 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 TRBC1P01850 177 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 SERPIND1P05546 499 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 MSH3P20585 1137 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 PRKG2Q13237 762 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 INPP5AQ14642 412 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 RFTN1Q14699 578 aaPredicted RBP9.15□□□□□ -0.94
PRDM9-201ENST00000296682 MYLK3Q32MK0 819 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 FAM174BQ3ZCQ3 159 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 ARHGAP15Q53QZ3 475 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 C6orf136Q5SQH8 315 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 CRTC3Q6UUV7 619 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 TRAPPC5Q8IUR0 188 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 OFCC1Q8IZS5 231 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 STK40Q8N2I9 435 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 APOLD1Q96LR9 279 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 EMILIN2Q9BXX0 1053 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 TDP1Q9NUW8 608 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 DDX18Q9NVP1 670 aaKnown RBP9.15□□□□□ -0.94
PRDM9-201ENST00000296682 LIMD1Q9UGP4 676 aa9.15□□□□□ -0.94
PRDM9-201ENST00000296682 C15orf38-AP3S2A0A0A6YYH1 394 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 ABHD14A-ACY1A0A1B0GW23 586 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 TRIM43BA6NCK2 446 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 GBAP04062 536 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 LINGO3P0C6S8 592 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 UROSP10746 265 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 SRCP12931 536 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 CR2P20023 1033 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 IRS1P35568 1242 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 AP1S1P61966 158 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 TIAL1Q01085 375 aaKnown RBP eCLIP9.15□□□□□ -0.95
PRDM9-201ENST00000296682 CRTC1Q6UUV9 634 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 CCDC149Q6ZUS6 474 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 SZRD1Q7Z422 152 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 TRMT11Q7Z4G4 463 aaKnown RBP9.15□□□□□ -0.95
PRDM9-201ENST00000296682 ARPINQ7Z6K5 226 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 ZSWIM9Q86XI8 627 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 SYTL1Q8IYJ3 562 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 CBR4Q8N4T8 237 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 KRTCAP2Q8N6L1 136 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 PHC3Q8NDX5 983 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 SPDYE1Q8NFV5 336 aaPredicted RBP9.15□□□□□ -0.95
PRDM9-201ENST00000296682 TRIM43Q96BQ3 446 aaPredicted RBP9.15□□□□□ -0.95
PRDM9-201ENST00000296682 LRRC58Q96CX6 371 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 CENPKQ9BS16 269 aa9.15□□□□□ -0.95
PRDM9-201ENST00000296682 DHRS12A0PJE2 317 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms