RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 ST14Q9Y5Y6 855 aa18.06■□□□□ 0.48
SHKBP1-201ENST00000291842 PIKFYVEQ9Y2I7 2098 aa18.06■□□□□ 0.48
SHKBP1-201ENST00000291842 SMIM31A0A1B0GVY4 71 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 RGS4P49798 205 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 TXNL4AP83876 142 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 MYLK3Q32MK0 819 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 KRT80Q6KB66 452 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 SLC39A5Q6ZMH5 540 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 CARM1Q86X55 608 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 ZFAND4Q86XD8 727 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 GPR26Q8NDV2 337 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 SEPHS2Q99611 448 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 SEZ6LQ9BYH1 1024 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 FAM126AQ9BYI3 521 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 LATS2Q9NRM7 1088 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 LSM7Q9UK45 103 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 PTBP2Q9UKA9 531 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 SH3BP1Q9Y3L3 701 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 ANGPTL3Q9Y5C1 460 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 H0YJX3 145 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 VILLO15195 856 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 OLFM2O95897 454 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 GNAO1P09471 354 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 FASP25445 335 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 MTPNP58546 118 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 SELPLGQ14242 412 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 NHSL2Q5HYW2 709 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 RFLNAQ6ZTI6 216 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 FIBCD1Q8N539 461 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 ZBTB2Q8N680 514 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 HERC2P3Q9BVR0 1158 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 WWOXQ9NZC7 414 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 OAZ3Q9UMX2 235 aa18.05■□□□□ 0.48
SHKBP1-201ENST00000291842 OTCP00480 354 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 SLC2A4P14672 509 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 DGKAP23743 735 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 OR4D2P58180 307 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 HMGCS1Q01581 520 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 REM2Q8IYK8 340 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 CMTM8Q8IZV2 173 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 PDPRQ8NCN5 879 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 ATP13A3Q9H7F0 1226 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 SPG21Q9NZD8 308 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 OARD1Q9Y530 152 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 RNF103-CHMP3A0A140T963 221 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 A0A1W2PRU2 124 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 CHRM1P11229 460 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 RPS3P23396 243 aaKnown RBP eCLIP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 MRPL19P49406 292 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 RPL38P63173 70 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 APOFQ13790 326 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 PTGR1Q14914 329 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 PLEKHG6Q3KR16 790 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 FAM47BQ8NA70 645 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 NCSTNQ92542 709 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 MRPS31Q92665 395 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 ACDQ96AP0 544 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 DGCR14Q96DF8 476 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 MTFMTQ96DP5 389 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 RPF2Q9H7B2 306 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 ZFP14Q9HCL3 533 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 HEBP1Q9NRV9 189 aa18.04■□□□□ 0.48
SHKBP1-201ENST00000291842 MYOFQ9NZM1 2061 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 TCRBV5S2A0A599 114 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 DLGAP1O14490 977 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 IGSF6O95976 241 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 HRH2P25021 359 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 GGT5P36269 586 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 EMX2Q04743 252 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 GPRC6AQ5T6X5 926 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 CNKSR3Q6P9H4 555 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 ANKRD33Q7Z3H0 272 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 TRPV3Q8NET8 790 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 ZFP28Q8NHY6 868 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 CCT7Q99832 543 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 PAK6Q9NQU5 681 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 ABCB8Q9NUT2 735 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 OLAHQ9NV23 265 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 SMOXQ9NWM0 555 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 OPTCQ9UBM4 332 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 KLQ9UEF7 1012 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 GLUD1P00367 558 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 SPAM1P38567 509 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 ARHGEF7Q14155 803 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 LRRC66Q68CR7 880 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 CRTC1Q6UUV9 634 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 DLEU7Q6UYE1 221 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 ITIH5Q86UX2 942 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 PTRH1Q86Y79 214 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 FAM217AQ8IXS0 508 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 TSPAN14Q8NG11 270 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 ZNF689Q96CS4 500 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 CD244Q9BZW8 370 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 KIAA1522Q9P206 1035 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 ZNHIT2Q9UHR6 403 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 ATP11BQ9Y2G3 1177 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 DOCK6Q96HP0 2047 aa18.03■□□□□ 0.48
SHKBP1-201ENST00000291842 PRRC2BQ5JSZ5 2229 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms