RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 IMP3Q9NV31 184 aaKnown RBP10.24□□□□□ -0.77
SNF8-201ENST00000290330 CRLS1Q9UJA2 301 aa10.24□□□□□ -0.77
SNF8-201ENST00000290330 MRFAP1Q9Y605 127 aa10.24□□□□□ -0.77
SNF8-201ENST00000290330 BAHCC1Q9P281 2608 aa10.24□□□□□ -0.77
SNF8-201ENST00000290330 LOC101059948A0A1B0GTJ6 334 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 EFCAB8A8MWE9 144 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 CCL22O00626 93 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 DLGAP3O95886 979 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 TPH1P17752 444 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 ITGALP20701 1170 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 PPP1CAP62136 330 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 CKAP4Q07065 602 aaKnown RBP10.23□□□□□ -0.77
SNF8-201ENST00000290330 IL11RAQ14626 422 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 P3H1Q32P28 736 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 GPR33Q49SQ1 333 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 CACHD1Q5VU97 1274 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 IRGCQ6NXR0 463 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 FAM92BQ6ZTR7 304 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 SNX20Q7Z614 316 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 UNC5BQ8IZJ1 945 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 NXPE1Q8N323 547 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 SLC35F6Q8N357 371 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 ULK4Q96C45 1275 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 DCUN1D1Q96GG9 259 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 SLC45A3Q96JT2 553 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 DNAJC1Q96KC8 554 aaKnown RBP10.23□□□□□ -0.77
SNF8-201ENST00000290330 OR6C1Q96RD1 312 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 COPS8Q99627 209 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 WWP1Q9H0M0 922 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 TRIT1Q9H3H1 467 aaKnown RBP10.23□□□□□ -0.77
SNF8-201ENST00000290330 FAM96AQ9H5X1 160 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 LRRC40Q9H9A6 602 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 GPN2Q9H9Y4 310 aaPredicted RBP10.23□□□□□ -0.77
SNF8-201ENST00000290330 SEMA5BQ9P283 1151 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 FAM8A1Q9UBU6 413 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 CDC23Q9UJX2 597 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 ACSL5Q9ULC5 683 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 JRKLQ9Y4A0 524 aa10.23□□□□□ -0.77
SNF8-201ENST00000290330 CFAP20Q9Y6A4 193 aaKnown RBP10.23□□□□□ -0.77
SNF8-201ENST00000290330 IGLV3-16A0A075B6K0 115 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 IGHV5-51A0A0C4DH38 117 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 TRBV5-4A0A0C4DH59 114 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 C17orf113A0A1B0GUU1 675 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 H7C0S8 307 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 NKX2-8O15522 239 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 AP2A1O95782 977 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 POLBP06746 335 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 TUBBP07437 444 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 SLC35G4P0C7Q5 338 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 FAM87AP0C7U9 286 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 RALBP11234 206 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 FGF5P12034 268 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 ATP1B2P14415 290 aaPredicted RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 ZNF28P17035 718 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 ITGB6P18564 788 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 NELFEP18615 380 aaKnown RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 STIP1P31948 543 aaKnown RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 MC4RP32245 332 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 PRLHRP49683 370 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 CDKN1CP49918 316 aaPredicted RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 ABHD18Q0P651 414 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 MAP7Q14244 749 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 PLCL1Q15111 1095 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 CAPRIN2Q6IMN6 1127 aaKnown RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 DUS1LQ6P1R4 473 aaKnown RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 KLHL35Q6PF15 583 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 MICALCLQ6ZW33 695 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 CFAP206Q8IYR0 622 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 ESX1Q8N693 406 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 LILRA3Q8N6C8 439 aaPredicted RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 HEXDCQ8WVB3 486 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 ZFPM2Q8WW38 1151 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 ATG4AQ8WYN0 398 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 UBXN4Q92575 508 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 KIAA1143Q96AT1 154 aaPredicted RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 CDKN2AIPNLQ96HQ2 116 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 SLC41A2Q96JW4 573 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 C12orf66Q96MD2 445 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 ULBP3Q9BZM4 244 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 KIR3DX1Q9H7L2 352 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 NLE1Q9NVX2 485 aaPredicted RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 PIH1D1Q9NWS0 290 aaKnown RBP10.22□□□□□ -0.77
SNF8-201ENST00000290330 IL17BQ9UHF5 180 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 SLC24A2Q9UI40 661 aa10.22□□□□□ -0.77
SNF8-201ENST00000290330 ATMQ13315 3056 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 COL6A6A6NMZ7 2263 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 OR5K3A6NET4 321 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 ZNF891A8MT65 544 aaPredicted RBP10.21□□□□□ -0.77
SNF8-201ENST00000290330 CFAP99D6REC4 459 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 PSMD3O43242 534 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 LIASO43766 372 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 PRSS56P0CW18 603 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 SFTPCP11686 197 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 PSMA3P25788 255 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 ACRV1P26436 265 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 STAT5AP42229 794 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 NFATC3Q12968 1075 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 POU6F1Q14863 301 aa10.21□□□□□ -0.77
SNF8-201ENST00000290330 OASLQ15646 514 aaKnown RBP10.21□□□□□ -0.77
SNF8-201ENST00000290330 ZNF658BQ4V348 819 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms