RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ERVPABLB-1P60509 514 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 IRF8Q02556 426 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 ABRAXAS2Q15018 415 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 RFTN2Q52LD8 501 aaPredicted RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 LETMD1Q6P1Q0 360 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 C17orf99Q6UX52 265 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 P3H2Q8IVL5 708 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 ZNF366Q8N895 744 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 UTP15Q8TED0 518 aaKnown RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 SLC47A1Q96FL8 570 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 MTERF1Q99551 399 aaKnown RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 CGREF1Q99674 301 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 TUBB1Q9H4B7 451 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 TLR9Q9NR96 1032 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 LOC730098B7Z3J9 87 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 USP41Q3LFD5 358 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 NADSYN1Q6IA69 706 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 GOLGA7Q7Z5G4 137 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 ITCHQ96J02 903 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 PANX1Q96RD7 426 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 IFT80Q9P2H3 777 aaPredicted RBP15.66■□□□□ 0.1
SMAD6-201ENST00000288840 AASSQ9UDR5 926 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 ASB1Q9Y576 335 aa15.66■□□□□ 0.1
SMAD6-201ENST00000288840 GLYATL1P3A0A0U1RQE8 302 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 MYO1DO94832 1006 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 THRBP10828 461 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 ZNF182P17025 639 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 CHRNA6Q15825 494 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 BLOC1S3Q6QNY0 202 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 NECAB2Q7Z6G3 386 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 STK40Q8N2I9 435 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 PPP3R2Q96LZ3 170 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 LRRC3Q9BY71 257 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 CCM2LQ9NUG4 571 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 INTS10Q9NVR2 710 aaKnown RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 AQP12BA6NM10 295 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 RFXANKO14593 260 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 VILLO15195 856 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 STK16O75716 305 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 CAPGP40121 348 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 SGSHP51688 502 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 BTG3Q14201 252 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 AQP12AQ8IXF9 295 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 RBFAQ8N0V3 343 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 SLC13A3Q8WWT9 602 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 MYLIPQ8WY64 445 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 PSKH2Q96QS6 385 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 DERL2Q9GZP9 239 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 TMEM181Q9P2C4 612 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 GNPTGQ9UJJ9 305 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 Q9Y3F1 56 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 H3BNH8 94 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 SYN3O14994 580 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 EOMESO95936 686 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 LRG1P02750 347 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 SMIM18P0DKX4 95 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 CDH2P19022 906 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 SLC5A2P31639 672 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 IDH2P48735 452 aaKnown RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 CYP4F2P78329 520 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 CYP4F3Q08477 520 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 TRIM16LQ309B1 348 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 ADGRF1Q5T601 910 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 UBE2R2Q712K3 238 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 RTN4RL1Q86UN2 441 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 HID1Q8IV36 788 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 RNF168Q8IYW5 571 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 ELMO1Q92556 727 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 ACAT2Q9BWD1 397 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 HMX1Q9NP08 348 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-201ENST00000288840 RNF186Q9NXI6 227 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 CFAP97Q9P2B7 532 aa15.65■□□□□ 0.1
SMAD6-201ENST00000288840 PRR23AA6NEV1 266 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 GPIP06744 558 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 MMP2P08253 660 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 COX7A2P14406 83 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 DGKEP52429 567 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 RAD23AP54725 363 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 FAM189BP81408 668 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 CARTPTQ16568 116 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 MEP1AQ16819 746 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 MRPL10Q7Z7H8 261 aaKnown RBP15.64■□□□□ 0.09
SMAD6-201ENST00000288840 PLD3Q8IV08 490 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 SYTL1Q8IYJ3 562 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 COLGALT2Q8IYK4 626 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 CORO1BQ9BR76 489 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 COL6A1P12109 1028 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 NNMTP40261 264 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 ACADVLP49748 655 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 GPR17Q13304 367 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 HMBOX1Q6NT76 420 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 ATOH8Q96SQ7 321 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 COPS8Q99627 209 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 NLE1Q9NVX2 485 aaPredicted RBP15.64■□□□□ 0.09
SMAD6-201ENST00000288840 ATP11BQ9Y2G3 1177 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 ELOVL7A1L3X0 281 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 SERPINA4P29622 427 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 PTGER3P43115 390 aa15.64■□□□□ 0.09
SMAD6-201ENST00000288840 YBX1P67809 324 aaKnown RBP15.64■□□□□ 0.09
SMAD6-201ENST00000288840 DAB2P98082 770 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms