RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ABRQ12979 859 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 KCNC3Q14003 757 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 VGLL4Q14135 290 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ARHGAP19Q14CB8 494 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ZMYND11Q15326 602 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CDSNQ15517 529 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CEBPEQ15744 281 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 GSTA3Q16772 222 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 LRIT3Q3SXY7 679 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 SPDYE7PQ495Y7 208 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 NOMO2Q5JPE7 1267 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 C6orf136Q5SQH8 315 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ANXA8L1Q5VT79 327 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 NAIF1Q69YI7 327 aaPredicted RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 CEP85Q6P2H3 762 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 KCNV1Q6PIU1 500 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 FOXR2Q6PJQ5 311 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CLEC17AQ6ZS10 378 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ZNF572Q7Z3I7 529 aaPredicted RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 SLC46A3Q7Z3Q1 461 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 USP37Q86T82 979 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 PDSS2Q86YH6 399 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 TRIML2Q8N7C3 387 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 PLD5Q8N7P1 536 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ZNF321PQ8N8H1 164 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 NLGN4YQ8NFZ3 816 aaPredicted RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 IL17DQ8TAD2 202 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 PTPMT1Q8WUK0 201 aaPredicted RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 SLC25A43Q8WUT9 341 aaPredicted RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 KAT2AQ92830 837 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 HAS1Q92839 578 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 CCDC51Q96ER9 411 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 TPD52L3Q96J77 140 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 PLIN2Q99541 437 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 ZBTB18Q99592 522 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 PAAF1Q9BRP4 392 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 SIKE1Q9BRV8 207 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 MRI1Q9BV20 369 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 OSBPL8Q9BZF1 889 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 RTN4RQ9BZR6 473 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 C11orf54Q9H0W9 315 aaPredicted RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 RMND5AQ9H871 391 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 PARVGQ9HBI0 331 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 TRPM5Q9NZQ8 1165 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 OGFRQ9NZT2 677 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 VPS18Q9P253 973 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 HDAC6Q9UBN7 1215 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 TRMT6Q9UJA5 497 aaKnown RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 GMEB2Q9UKD1 530 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 DNPEPQ9ULA0 475 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 BARX2Q9UMQ3 279 aaPredicted RBP4.55□□□□□ -1.68
CD44-202ENST00000278385 DDX19BQ9UMR2 479 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 PLEKHA6Q9Y2H5 1048 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 PCDHB2Q9Y5E7 798 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 PCDHA10Q9Y5I2 948 aa4.55□□□□□ -1.68
CD44-202ENST00000278385 RPAP1Q9BWH6 1393 aaPredicted RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 MROH7-TTC4A0A0A0MT08 1334 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 LOC105369274A0A096LPK9 316 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 CCL15-CCL14A0A0B4J2E2 113 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 LOC102723532A0A0G2JNH3 316 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 TRBV2A0A0J9YWF9 115 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 EDDM13A0A1B0GTR0 161 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 SERTM2A0A1B0GWG4 89 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 FAM230AA0A1W2PPH8 454 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 A0A1W2PRG0 241 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 TRIM49BA6NDI0 452 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 FAM90A8PA6NJQ4 464 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 VGLL3A8MV65 326 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 F8VZ95 297 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 STMND1H3BQB6 276 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 MEIS2O14770 477 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ATP2A1O14983 1001 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 MATN3O15232 486 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 RANBP6O60518 1105 aaKnown RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 MITFO75030 526 aaPredicted RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 SLC43A1O75387 559 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 CTAG2O75638 210 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 IDH1O75874 414 aaKnown RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 PRSS23O95084 383 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ZNF202O95125 648 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 FGBP02675 491 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 PCCBP05166 539 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 LIPFP07098 398 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 GALTP07902 379 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 FAM90A13PP0C7W8 464 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 FAM90A24PP0C7X0 464 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 RALAP11233 206 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 AREGP15514 252 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 VCLP18206 1134 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ITIH1P19827 911 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 CYP2A7P20853 494 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ACHEP22303 614 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 VIPR2P41587 438 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ARHGAP25P42331 645 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 BTDP43251 543 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 CAMPP49913 170 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 UCP2P55851 309 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 SP3Q02447 781 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 PPIL2Q13356 520 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 FHL3Q13643 280 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms