RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CXCR6O00574 342 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 KLK8O60259 260 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 ECI2O75521 394 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 SBF1O95248 1867 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 S100A5P33763 92 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 MAP2K4P45985 399 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 NCS1P62166 190 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 TIAL1Q01085 375 aaKnown RBP eCLIP12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 RAPSNQ13702 412 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 TRIP4Q15650 581 aaPredicted RBP12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 MARC1Q5VT66 337 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 TAS2R42Q7RTR8 314 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 BHLHA9Q7RTU4 235 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 B3GNT8Q7Z7M8 397 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 SPNS2Q8IVW8 549 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 CCDC103Q8IW40 242 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 ZNF548Q8NEK5 533 aaPredicted RBP12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 ZMIZ2Q8NF64 920 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 CNIH3Q8TBE1 160 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 ATL1Q8WXF7 558 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 TBC1D20Q96BZ9 403 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 BTBD2Q9BX70 525 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 NT5MQ9NPB1 228 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 LTB4R2Q9NPC1 389 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 CATSPERZQ9NTU4 200 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 PCTPQ9UKL6 214 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 RIMKLBQ9ULI2 386 aa12.21□□□□□ -0.46
CHMP2B-201ENST00000263780 DICER1Q9UPY3 1922 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 HHLA1C9JL84 531 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 IDH3BO43837 385 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 PAGE1O75459 146 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 RPP40O75818 363 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 GOT2P00505 430 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 FTH1P02794 183 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 CD36P16671 472 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 SOX4Q06945 474 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 CYP4F3Q08477 520 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 RSBN1Q5VWQ0 802 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 CAPN13Q6MZZ7 669 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 SHQ1Q6PI26 577 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 CYP20A1Q6UW02 462 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 ZNF540Q8NDQ6 660 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 OR2T11Q8NH01 316 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 DNAJB8Q8NHS0 232 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 FRS2Q8WU20 508 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 SLC38A4Q969I6 547 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 PCED1BQ96HM7 432 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 FCRL2Q96LA5 508 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 TBATAQ96M53 351 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 ZNF382Q96SR6 550 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 DCSTAMPQ9H295 470 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 GOLGA2P5Q9HBQ8 144 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 TM9SF3Q9HD45 589 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 ACOT13Q9NPJ3 140 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 DCAF13Q9NV06 445 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 TMEFF2Q9UIK5 374 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 EIF3LQ9Y262 564 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 PPP2R3BQ9Y5P8 575 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 ZNF236Q9UL36 1845 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 PNMA8CA0A1B0GUJ8 204 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 PABPN1LA6NDY0 278 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 WASH4PA8MWX3 477 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 EVPLLA8MZ36 301 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 IRAK2O43187 625 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 LDB2O43679 373 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 CCNKO75909 580 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 IGLV3-25P01717 112 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 ZNF286BP0CG31 522 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 KRT6CP48668 564 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 GMPSP49915 693 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 FCGRTP55899 365 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 PRKCDQ05655 676 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 DMPKQ09013 629 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 DGCR6Q14129 220 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 HABP4Q5JVS0 413 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 SIRPB2Q5JXA9 342 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 CATSPEREQ5SY80 951 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 MARCH8Q5T0T0 291 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 PRAMEF18Q5VWM3 479 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 STEAP3Q658P3 488 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 GPR149Q86SP6 731 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 MICU2Q8IYU8 434 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 HS3ST5Q8IZT8 346 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 ELMOD1Q8N336 334 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 OR4L1Q8NH43 312 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 EMID1Q96A84 441 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 SNX18Q96RF0 628 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 C16orf70Q9BSU1 422 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 GABARAPL1Q9H0R8 117 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 SMOC2Q9H3U7 446 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 CARS2Q9HA77 564 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 NUDT5Q9UKK9 219 aa12.2□□□□□ -0.46
CHMP2B-201ENST00000263780 OR51F1A6NGY5 319 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 TBX1O43435 398 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 FAM20BO75063 409 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 MED26O95402 600 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 MT-ND2P03891 347 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 DARSP14868 501 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 CD6P30203 668 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms