RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MAGEC1O60732 1142 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 PROCP04070 461 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 HOXC4P09017 264 aaPredicted RBP9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 SP9P0CG40 484 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ACP5P13686 325 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 CD38P28907 300 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ETV4P43268 484 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 RABIFP47224 123 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 CSNK1EP49674 416 aaKnown RBP9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 YPEL5P62699 121 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ARHGAP8P85298 464 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 GUCY1A3Q02108 690 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ILF2Q12905 390 aaKnown RBP9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ABRQ12979 859 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 FZD2Q14332 565 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ANGPT1Q15389 498 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 TSNQ15631 228 aaKnown RBP9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 FAM83EQ2M2I3 478 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ALG11Q2TAA5 492 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 PYCR3Q53H96 274 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 PRAMEF14Q5SWL7 426 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 LRRC8EQ6NSJ5 796 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 KYAT3Q6YP21 454 aaKnown RBP9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 LPCAT2Q7L5N7 544 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ISCA2Q86U28 154 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 HID1Q8IV36 788 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 NKAPQ8N5F7 415 aaKnown RBP9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 CFAP61Q8NHU2 1237 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 CCL4L1Q8NHW4 92 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 GAB3Q8WWW8 586 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 EXT2Q93063 718 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 MOCOSQ96EN8 888 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 KLHDC7BQ96G42 594 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 TSNARE1Q96NA8 513 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 PCED1AQ9H1Q7 454 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 NMRAL1Q9HBL8 299 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 KLC4Q9NSK0 619 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 MKS1Q9NXB0 559 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 NKIRAS1Q9NYS0 192 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 KLQ9UEF7 1012 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 KLF15Q9UIH9 416 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ADAMTS6Q9UKP5 1117 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 PSMD13Q9UNM6 376 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 KCNK6Q9Y257 313 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 FANCMQ8IYD8 2048 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 TNRC6BQ9UPQ9 1833 aaKnown RBP9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 ARHGEF17Q96PE2 2063 aaPredicted RBP9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 SLC5A10A0PJK1 596 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 NEMP2A6NFY4 417 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 MGAT4DA6NG13 374 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 QSOX1O00391 747 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 BTN3A1O00481 513 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 KMOO15229 486 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 GPC4O75487 556 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 ZWINTO95229 277 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 APOA4P06727 396 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 GSTA1P08263 222 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 COL6A2P12110 1019 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 DGKAP23743 735 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 HTR1BP28222 390 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 SRP54P61011 504 aaKnown RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 EIF2B5Q13144 721 aaKnown RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 GBX1Q14549 363 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 SEPT7Q16181 437 aaKnown RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 INSCQ1MX18 579 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 PLK5Q496M5 336 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 SYTL3Q4VX76 610 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TECRLQ5HYJ1 363 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 AGAP9Q5VTM2 703 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 HHATQ5VTY9 493 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TAX1BP1Q86VP1 789 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 AMZ2Q86W34 360 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 SPATS2Q86XZ4 545 aaKnown RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 GALNT13Q8IUC8 556 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 CCDC63Q8NA47 563 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 OR2L2Q8NH16 312 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 SKA2Q8WVK7 121 aaPredicted RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 ASZ1Q8WWH4 475 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 DLG3Q92796 817 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 SCARF2Q96GP6 870 aaPredicted RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 ZNF514Q96K75 400 aaPredicted RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TSSK1BQ9BXA7 367 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 DERL2Q9GZP9 239 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TMEM168Q9H0V1 697 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 COG4Q9H9E3 785 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TMEM74BQ9NUR3 256 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 XPR1Q9UBH6 696 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 CIDEBQ9UHD4 219 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 FBXO4Q9UKT5 387 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 SPTY2D1-AS1A0A0U1RR47 76 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 NCF1BA6NI72 391 aaPredicted RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 NCF1CA8MVU1 366 aaPredicted RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TARM1B6A8C7 271 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 G3V2L1 256 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TM9SF1O15321 606 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 SLCO2B1O94956 709 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 RASGRP1O95267 797 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 NCF1P14598 390 aaPredicted RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 AK4P27144 223 aaPredicted RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 RPL10P27635 214 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms