RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 IRF9Q00978 393 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 HSF2Q03933 536 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 TAC4Q86UU9 113 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 TMC8Q8IU68 726 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 ZCCHC10Q8TBK6 192 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 BRSK1Q8TDC3 778 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 BORCS5Q969J3 196 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 C11orf24Q96F05 449 aaPredicted RBP10.12□□□□□ -0.79
PHF3-201ENST00000262043 ART5Q96L15 291 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 CCDC28BQ9BUN5 200 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 BHLHE41Q9C0J9 482 aaPredicted RBP10.12□□□□□ -0.79
PHF3-201ENST00000262043 TIMMDC1Q9NPL8 285 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 SCN11AQ9UI33 1791 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 C2CD4BA6NLJ0 364 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 SMARCD3Q6STE5 483 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 CEP68Q76N32 757 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 FBXO22Q8NEZ5 403 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 KLHL32Q96NJ5 620 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 TRPS1Q9UHF7 1281 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 SLIT2O94813 1529 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 RIIAD1A6NNX1 92 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 PLK4O00444 970 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 PRNPP04156 253 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 NR4A1P22736 598 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 SDC2P34741 201 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 ACTR3P61158 418 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 ABATP80404 500 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 ATXN7L2Q5T6C5 722 aaPredicted RBP10.12□□□□□ -0.79
PHF3-201ENST00000262043 TMEM220Q6QAJ8 160 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 PAOXQ6QHF9 649 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 THAP5Q7Z6K1 395 aa10.12□□□□□ -0.79
PHF3-201ENST00000262043 ARL14EPQ8N8R7 260 aaPredicted RBP10.12□□□□□ -0.79
PHF3-201ENST00000262043 MED1Q15648 1581 aaPredicted RBP10.12□□□□□ -0.79
PHF3-201ENST00000262043 SCAMP1O15126 338 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 DUSP11O75319 330 aaKnown RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 OR4F21O95013 312 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 MYCLP1P12525 358 aaPredicted RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 CD247P20963 164 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 PBX3P40426 434 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 PTP4A2Q12974 167 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 TAF1AQ15573 450 aaPredicted RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 MINDY4Q4G0A6 757 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 RNF220Q5VTB9 566 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 FAM156AQ8NDB6 213 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 B3GALT6Q96L58 329 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 LPIN3Q9BQK8 851 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 CACNG4Q9UBN1 327 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 SEPT4O43236 478 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 DNAJA2O60884 412 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 METTL18O95568 372 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 POP4O95707 220 aaKnown RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 PTGIRP43119 386 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 ASPAP45381 313 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 YBEYP58557 167 aaPredicted RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 SEMG2Q02383 582 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 NDUFA9Q16795 377 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 TSTD2Q5T7W7 516 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 ATCAYQ86WG3 371 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 CLEC4DQ8WXI8 215 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 RNF31Q96EP0 1072 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 JSRP1Q96MG2 331 aaPredicted RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 MAGEH1Q9H213 219 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 SLC38A8A6NNN8 435 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 CBFA2T3O75081 653 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 IDSP22304 550 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 GPD2P43304 727 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 ARHGDIBP52566 201 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 CBX3Q13185 183 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 CHIT1Q13231 466 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 FAM174BQ3ZCQ3 159 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 SMG7Q92540 1137 aaKnown RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 C5orf34Q96MH7 638 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 FAM83DQ9H4H8 585 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.11□□□□□ -0.79
PHF3-201ENST00000262043 TESMINQ9Y4I5 508 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 NOBOXO60393 691 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 IFNA6P05013 189 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 MAT2AP31153 395 aaKnown RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 PUDPQ08623 228 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 IQCF2Q8IXL9 164 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 CBR4Q8N4T8 237 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 SNX33Q8WV41 574 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 MARCH7Q9H992 704 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 ZNF541Q9H0D2 1346 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 MAGEB17A8MXT2 336 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 UGT1A9O60656 530 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 MTRF1O75570 445 aaKnown RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 CLUP10909 449 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 SLC1A2P43004 574 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 IL10RBQ08334 325 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 MPP5Q8N3R9 675 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 C11orf65Q8NCR3 313 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 KBTBD7Q8WVZ9 684 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 UGT1A7Q9HAW7 530 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 UGT1A10Q9HAW8 530 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 UGT1A8Q9HAW9 530 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 RSL1D1O76021 490 aaKnown RBP10.11□□□□□ -0.79
PHF3-201ENST00000262043 C8GP07360 202 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 IL12BP29460 328 aa10.11□□□□□ -0.79
PHF3-201ENST00000262043 GDF10P55107 478 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms