RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 B2RBV5 119 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 STC2O76061 302 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 RGS20O76081 388 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 UROSP10746 265 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 EPCAMP16422 314 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 EPORP19235 508 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 ITGB7P26010 798 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 TARSP26639 723 aaKnown RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 MAPKAPK3Q16644 382 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 KIAA0895LQ68EN5 471 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 UNQ6126/PRO20091Q6UXV3 157 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 RANBP9Q96S59 729 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 PTGES2Q9H7Z7 377 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 L2HGDHQ9H9P8 463 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 TMED5Q9Y3A6 229 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 WASHC1A8K0Z3 465 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 ANKRD66B4E2M5 251 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 WASH3PC4AMC7 463 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 BMP7P18075 431 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 RRADP55042 308 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 ZSWIM7Q19AV6 140 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 WASH2PQ6VEQ5 465 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 ARL14Q8N4G2 192 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 PITHD1Q9GZP4 211 aaPredicted RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 CAAP1Q9H8G2 361 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 POP7O75817 140 aaKnown RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 ABCB1P08183 1280 aaPredicted RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 SF3A3Q12874 501 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 SLC13A2Q13183 592 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 RNASEH2BQ5TBB1 312 aaKnown RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 USP30Q70CQ3 517 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 PROSER1Q86XN7 944 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 SLC43A3Q8NBI5 491 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 CCDC28BQ9BUN5 200 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 BRINP2Q9C0B6 783 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 MARCOQ9UEW3 520 aaPredicted RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 OAS3Q9Y6K5 1087 aaKnown RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 MRASO14807 208 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 FKBP6O75344 327 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 ERAL1O75616 437 aaKnown RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 CRATP43155 626 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 OR4A15Q8NGL6 344 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 FAM136AQ96C01 138 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 PPP1R36Q96LQ0 422 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 TACO1Q9BSH4 297 aaKnown RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 FKBPLQ9UIM3 349 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 RIMKLBQ9ULI2 386 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 BCORQ6W2J9 1755 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 A0A1W2PQU0 124 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 SRRM3A6NNA2 597 aaPredicted RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 MMP20O60882 483 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 HOXA11P31270 313 aaPredicted RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 CTSOP43234 321 aaPredicted RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 SVOPQ8N4V2 548 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 TMEM156Q8N614 296 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 C12orf76Q8N812 135 aaPredicted RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 TRPC4APQ8TEL6 797 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 LRTM1Q9HBL6 345 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 TIGARQ9NQ88 270 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 KCNQ1P51787 676 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 AQP5P55064 265 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 VAC14Q08AM6 782 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 CNGA3Q16281 694 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 GSPT2Q8IYD1 628 aaKnown RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 UBR7Q8N806 425 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 SPPL3Q8TCT6 385 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 CYP2S1Q96SQ9 504 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 EPYCQ99645 322 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 CPEB1Q9BZB8 566 aaKnown RBP13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 MLXIPLQ9NP71 852 aa13.22□□□□□ -0.29
PRPF38A-201ENST00000257181 LIMK2P53671 638 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 MRPS25P82663 173 aaKnown RBP13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 NUP54Q7Z3B4 507 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 ZDHHC14Q8IZN3 488 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 FGF13Q92913 245 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 SEMA4AQ9H3S1 761 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 NBNO60934 754 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 TFPIP10646 304 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 SRFP11831 508 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 RAB28P51157 221 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 RPS15AP62244 130 aaKnown RBP13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 SLC22A8Q8TCC7 542 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 TMEM174Q8WUU8 243 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 SNX15Q9NRS6 342 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 NLE1Q9NVX2 485 aaPredicted RBP13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 A0A0J9YVX5 310 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 STX11O75558 287 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 TRBC1P01850 177 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 SHHQ15465 462 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 ZNF765Q7L2R6 523 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 ZNF598Q86UK7 904 aaKnown RBP13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 ZNF276Q8N554 614 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 GPR21Q99679 349 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 LGR4Q9BXB1 951 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 SLC17A9Q9BYT1 436 aa13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 NOL6Q9H6R4 1146 aaKnown RBP13.21□□□□□ -0.29
PRPF38A-201ENST00000257181 PIGNO95427 931 aa13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 FESP07332 822 aa13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 GJA1P17302 382 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms