RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 RAP2CQ9Y3L5 183 aa7.34□□□□□ -1.23
MED28-201ENST00000237380 ATMINO43313 823 aaPredicted RBP7.34□□□□□ -1.24
MED28-201ENST00000237380 TPST1O60507 370 aa7.34□□□□□ -1.24
MED28-201ENST00000237380 CASP1P29466 404 aa7.34□□□□□ -1.24
MED28-201ENST00000237380 GNPDA1P46926 289 aa7.34□□□□□ -1.24
MED28-201ENST00000237380 ALG1LQ6GMV1 187 aa7.34□□□□□ -1.24
MED28-201ENST00000237380 ZNF662Q6ZS27 426 aa7.34□□□□□ -1.24
MED28-201ENST00000237380 OR7A2PQ8NGA2 310 aa7.34□□□□□ -1.24
MED28-201ENST00000237380 FCRL2Q96LA5 508 aaPredicted RBP7.34□□□□□ -1.24
MED28-201ENST00000237380 TUBGCP5Q96RT8 1024 aa7.34□□□□□ -1.24
MED28-201ENST00000237380 SMAD5Q99717 465 aaKnown RBP7.34□□□□□ -1.24
MED28-201ENST00000237380 GPATCH1Q9BRR8 931 aaKnown RBP7.34□□□□□ -1.24
MED28-201ENST00000237380 LRTM1Q9HBL6 345 aa7.34□□□□□ -1.24
MED28-201ENST00000237380 PLCL2Q9UPR0 1127 aa7.34□□□□□ -1.24
MED28-201ENST00000237380 SMCO3A2RU48 225 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 L7N2F9 121 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 IDH3BO43837 385 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 HEXBP07686 556 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 C1QTNF8P60827 252 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 VAMP2P63027 116 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 QPRTQ15274 297 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 TAF1AQ15573 450 aaPredicted RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 TMEM119Q4V9L6 283 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 DEFB107AQ8IZN7 70 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 ZSWIM2Q8NEG5 633 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 ZNF548Q8NEK5 533 aaPredicted RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 PFDN2Q9UHV9 154 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 IRS2Q9Y4H2 1338 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 FAM86B1E9PN63 330 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 STK16O75716 305 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 FAM86B2P0C5J1 330 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 GADD45AP24522 165 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 EIF2S3P41091 472 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 RBM34P42696 430 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 CTBP2P56545 445 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 SEZ6Q53EL9 994 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 HIPK1Q86Z02 1210 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 DCP2Q8IU60 420 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 PLXDC1Q8IUK5 500 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 RELL1Q8IUW5 271 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 IQCF2Q8IXL9 164 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 FAM86B1Q8N7N1 296 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 TC2NQ8N9U0 490 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 CATSPER2Q96P56 530 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 RNF157Q96PX1 679 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 GAL3ST4Q96RP7 486 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 SLC39A3Q9BRY0 314 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 CADM1Q9BY67 442 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 GBA3Q9H227 469 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 CDC42EP4Q9H3Q1 356 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 PLGRKTQ9HBL7 147 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 PIH1D1Q9NWS0 290 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 ELOA3DA6NLF2 546 aaPredicted RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 PAGE1O75459 146 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 ADSSP30520 456 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 CTSOP43234 321 aaPredicted RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 EEFSECP57772 596 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 DHCR24Q15392 516 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 GRIK5Q16478 980 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 ELOA3BQ3SY89 546 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 FAM151BQ6UXP7 276 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 PHF13Q86YI8 300 aaPredicted RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 PCDH20Q8N6Y1 951 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 ELOA3Q8NG57 546 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 CHP1Q99653 195 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 G6PC3Q9BUM1 346 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 HIPK2Q9H2X6 1198 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 ALG9Q9H6U8 611 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 LYARQ9NX58 379 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 NPIPA5E9PKD4 350 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 SLC22A3O75751 556 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 HOXB2P14652 356 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 IST1P53990 364 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 KCNC3Q14003 757 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 ADNP2Q6IQ32 1131 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 GDPD4Q6W3E5 623 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 ZNF783Q6ZMS7 281 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 TBC1D21Q8IYX1 336 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 KLHDC7BQ96G42 594 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 YIPF3Q9GZM5 350 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 GDAP2Q9NXN4 497 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 PADI3Q9ULW8 664 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 NPIPA1Q9UND3 350 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 DUSP10Q9Y6W6 482 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 C2orf72A6NCS6 295 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 PSMA1P25786 263 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 ACVR2AP27037 513 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 ICAM3P32942 547 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 TAF10Q12962 218 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 SYT16Q17RD7 645 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 SDR16C5Q8N3Y7 309 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 SETD6Q8TBK2 473 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 BMFQ96LC9 184 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 RBM4BQ9BQ04 359 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 RBM4Q9BWF3 364 aaKnown RBP7.33□□□□□ -1.24
MED28-201ENST00000237380 METTL7AQ9H8H3 244 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 TAS2R14Q9NYV8 317 aa7.33□□□□□ -1.24
MED28-201ENST00000237380 MROH1Q8NDA8 1641 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms