RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 DDNO94850 711 aaPredicted RBP13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 EIF2DP41214 584 aaKnown RBP13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 CLCNKBP51801 687 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 TXNDC11Q6PKC3 985 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 DCP2Q8IU60 420 aaKnown RBP13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 UMODL1-AS1Q8N2C9 162 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 GPRC5AQ8NFJ5 357 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 OR56A4Q8NGH8 313 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 CNIH3Q8TBE1 160 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 FRS2Q8WU20 508 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 TPK1Q9H3S4 243 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 EHD1Q9H4M9 534 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 DUSP21Q9H596 190 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 VAPAQ9P0L0 249 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 GALPQ9UBC7 116 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 LIMD1Q9UGP4 676 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 ADGRE2Q9UHX3 823 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 TMEM98Q9Y2Y6 226 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 IFT52Q9Y366 437 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 HS3ST4Q9Y661 456 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 ARL5AQ9Y689 179 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 FAM47E-STBD1D6RA91 191 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 TREHO43280 583 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 ITGAMP11215 1152 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 JUNDP17535 347 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 GJA5P36382 358 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 LSM3P62310 102 aaKnown RBP13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 NDUFA5Q16718 116 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 RFX4Q33E94 735 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 CATSPEREQ5SY80 951 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 GPRIN3Q6ZVF9 776 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 ABI1Q8IZP0 508 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 EID3Q8N140 333 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 TEX26Q8N6G2 289 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 NSMCE3Q96MG7 304 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 SIAEQ9HAT2 523 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 CATSPERZQ9NTU4 200 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 ERVK-18Q9QC07 812 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 FBXO10Q9UK96 956 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 ATP11BQ9Y2G3 1177 aa13.79□□□□□ -0.2
SCNN1A-201ENST00000228916 GNGT2O14610 69 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 BCKDKO14874 412 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 PRKD3O94806 890 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 ANGPTL1O95841 491 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 G6PDP11413 515 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 DGKQP52824 942 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 SLC35A2P78381 396 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 SF3B4Q15427 424 aaKnown RBP eCLIP13.78□□□□□ -0.28e-10■■■■□ 19.3
SCNN1A-201ENST00000228916 MAPK11Q15759 364 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 RBBP7Q16576 425 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 ADHFE1Q8IWW8 467 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 HMCESQ96FZ2 354 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 C17orf80Q9BSJ5 609 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 DSN1Q9H410 356 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 SPC25Q9HBM1 224 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 GBF1Q92538 1859 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 ISPDA4D126 451 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 PRMT5O14744 637 aaPredicted RBP13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 DFNA5O60443 496 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 RHOBTB1O94844 696 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 OR4F21O95013 312 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 CYP11A1P05108 521 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 HAPLN1P10915 354 aaPredicted RBP13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 PRKACGP22612 351 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 SERPINB1P30740 379 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 RCVRNP35243 200 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 RAD51Q06609 339 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 RAPSNQ13702 412 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 KIAA0040Q15053 153 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 THOC7Q6I9Y2 204 aaKnown RBP13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 TWF2Q6IBS0 349 aaKnown RBP13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 CYP20A1Q6UW02 462 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 OR13C4Q8NGS5 318 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 SCAMP5Q8TAC9 235 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 GIPC2Q8TF65 315 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 C17orf50Q8WW18 174 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 ZNF382Q96SR6 550 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 RTP3Q9BQQ7 232 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 PAAF1Q9BRP4 392 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 ASPSCR1Q9BZE9 553 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 TAS2R13Q9NYV9 303 aa13.78□□□□□ -0.2
SCNN1A-201ENST00000228916 GSTA4O15217 222 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 SEC24AO95486 1093 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 F2P00734 622 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 PCSK1P29120 753 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 MAP2K4P45985 399 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 MASP1P48740 699 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 ALDH7A1P49419 539 aaKnown RBP13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 PGFP49763 221 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 MLLT6P55198 1093 aaPredicted RBP13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 NCS1P62166 190 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 PPP1R8Q12972 351 aaKnown RBP13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 HABP4Q5JVS0 413 aaKnown RBP13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 VARS2Q5ST30 1063 aaKnown RBP13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 ATAD3BQ5T9A4 648 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 B3GNT8Q7Z7M8 397 aa13.77□□□□□ -0.2
SCNN1A-201ENST00000228916 CDYL2Q8N8U2 506 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms