RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 INCA1Q0VD86 236 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 GPR17Q13304 367 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 E2F2Q14209 437 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 TTC23Q5W5X9 447 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 LRRC49Q8IUZ0 686 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 PACRGLQ8N7B6 248 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 SUSD6Q92537 303 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 ZHX1-C8orf76Q96EF9 292 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 CITED4Q96RK1 184 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 IL12RB2Q99665 862 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 ROGDIQ9GZN7 287 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 VRTNQ9H8Y1 702 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 NANOGQ9H9S0 305 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 ZNF304Q9HCX3 659 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 TLR9Q9NR96 1032 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 KIAA1522Q9P206 1035 aaPredicted RBP11.37□□□□□ -0.59
CCND1-201ENST00000227507 ERVK-11Q9UQG0 969 aa11.37□□□□□ -0.59
CCND1-201ENST00000227507 G3V2T6 193 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 FAM72CH0Y354 149 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 SOAT2O75908 522 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 CHRNB1P11230 501 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 AGXTP21549 392 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 LAPTM4AQ15012 233 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 UPP1Q16831 310 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 FAM72AQ5TYM5 149 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 SYPL2Q5VXT5 272 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 FAM72DQ6L9T8 149 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 TMEM135Q86UB9 458 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 OSTM1Q86WC4 334 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 FAM72BQ86X60 149 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 FNDC5Q8NAU1 212 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 TSPAN17Q96FV3 270 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 C3orf30Q96M34 536 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 TOR3AQ9H497 397 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 RASSF1Q9NS23 344 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 PCDHB3Q9Y5E6 796 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 CCDC162PA2VCL2 907 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 ZSCAN5BA6NJL1 495 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 ZBTB42B2RXF5 422 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 TRIM24O15164 1050 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 RGS5O15539 181 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 ABCB7O75027 752 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 HSMCR30P0CW71 290 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 ZNF37AP17032 561 aaPredicted RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 CAPN3P20807 821 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 FMO3P31513 532 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 CLK3P49761 638 aaKnown RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 VAC14Q08AM6 782 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 MADCAM1Q13477 382 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 CYBRD1Q53TN4 286 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 PRMT9Q6P2P2 845 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 ANKRD13BQ86YJ7 626 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 FAM126BQ8IXS8 530 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 OR8H2Q8N162 312 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 S100ZQ8WXG8 99 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 TANKQ92844 425 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 RIPOR3Q96MK2 946 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 DEPDC7Q96QD5 511 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 EGFL8Q99944 293 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 RHOBTB2Q9BYZ6 727 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 CMTM6Q9NX76 183 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 ACTR3BQ9P1U1 418 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 TMEM181Q9P2C4 612 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 VPS9D1Q9Y2B5 631 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 CAB39Q9Y376 341 aaPredicted RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 YJEFN3A6XGL0 299 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 CCRL2O00421 344 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 SHMT2P34897 504 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 SOX4Q06945 474 aaPredicted RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 TRIP4Q15650 581 aaPredicted RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 SYT16Q17RD7 645 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 SGO1Q5FBB7 561 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 INTS11Q5TA45 600 aaKnown RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 PTRHD1Q6GMV3 140 aaKnown RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 MRNIPQ6NTE8 343 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 TBPL2Q6SJ96 375 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 CLYBLQ8N0X4 340 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 PDPRQ8NCN5 879 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 ZNF461Q8TAF7 563 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 TWIST2Q8WVJ9 160 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 BIRC7Q96CA5 298 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 SAMD11Q96NU1 681 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 POLR1EQ9GZS1 481 aaKnown RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 TP63Q9H3D4 680 aaPredicted RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 AGPAT4Q9NRZ5 378 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 TFECO14948 347 aaPredicted RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 NPHS1O60500 1241 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 GPIP06744 558 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 CORO1AP31146 461 aaKnown RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 MAP2K4P45985 399 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 PHC1P78364 1004 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 FNDC3BQ53EP0 1204 aaKnown RBP11.36□□□□□ -0.59
CCND1-201ENST00000227507 PCID2Q5JVF3 399 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 ADGRG5Q8IZF4 528 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 POF1BQ8WVV4 589 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 SCN3BQ9NY72 215 aa11.36□□□□□ -0.59
CCND1-201ENST00000227507 MEIS3P2A8K0S8 358 aa11.35□□□□□ -0.59
CCND1-201ENST00000227507 ADH1CP00326 375 aa11.35□□□□□ -0.59
CCND1-201ENST00000227507 GTF2E2P29084 291 aaKnown RBP11.35□□□□□ -0.59
CCND1-201ENST00000227507 IFNA8P32881 189 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms