RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CXCR6O00574 342 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PABPC4LP0CB38 370 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 DDX6P26196 483 aaKnown RBP eCLIP4.36□□□□□ -1.71
CHD9-201ENST00000219084 ACSL1P33121 698 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 UGT1A3P35503 534 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ADAM15Q13444 863 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 KLHL26Q53HC5 615 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 NOMO2Q5JPE7 1267 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 JAZF1Q86VZ6 243 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 TRAPPC5Q8IUR0 188 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PHYKPLQ8IUZ5 450 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 RNF148Q8N7C7 305 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 C7orf43Q8WVR3 580 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC38A4Q969I6 547 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 KCTD7Q96MP8 289 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 FCRL5Q96RD9 977 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MAPKAP1Q9BPZ7 522 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 LYVE1Q9Y5Y7 322 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZNFX1Q9P2E3 1918 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 A0A1B0GVM2 712 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 KLHL33A6NCF5 533 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 TCAF2A6NFQ2 919 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PLOD3O60568 738 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 TSPAN1O60635 241 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC35G4P0C7Q5 338 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PET100P0DJ07 73 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 DPEP1P16444 411 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZNF3P17036 446 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CD72P21854 359 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CDH8P55286 799 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 STXBP1P61764 594 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 PUDPQ08623 228 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 DUSP28Q4G0W2 176 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 TIGD2Q4W5G0 525 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 RNF220Q5VTB9 566 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 AADACL2Q6P093 401 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 METTL2BQ6P1Q9 378 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZCCHC12Q6PEW1 402 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 C6orf89Q6UWU4 347 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CES3Q6UWW8 571 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZNF783Q6ZMS7 281 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 RASSF6Q6ZTQ3 369 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SATL1Q86VE3 508 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CMASQ8NFW8 434 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 OR8J3Q8NGG0 315 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC35B2Q8TB61 432 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC13A3Q8WWT9 602 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 OR8D1Q8WZ84 308 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 NCSTNQ92542 709 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 NACC2Q96BF6 587 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ACTR6Q9GZN1 396 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MCUBQ9NWR8 336 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 C1orf109Q9NX04 203 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 COPZ2Q9P299 210 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PCDHGB2Q9Y5G2 931 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ADAMTSL3P82987 1691 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SCN7AQ01118 1682 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 YDJCA8MPS7 323 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 DFNA5O60443 496 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PEX11AO75192 247 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PCDH8O95206 1070 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ADH1AP07327 375 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ELFN1P0C7U0 828 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 HNRNPLP14866 589 aaKnown RBP eCLIP4.36□□□□□ -1.712e-6■■□□□ 12.1
CHD9-201ENST00000219084 CHRNB2P17787 502 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PRKCHP24723 683 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PBLDP30039 288 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 BUD31P41223 144 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 PTPN5P54829 565 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PLIN5Q00G26 463 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ECM1Q16610 540 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 FNDC3BQ53EP0 1204 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 IFI44LQ53G44 452 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 EGFLAMQ63HQ2 1017 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC9A4Q6AI14 798 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PYHIN1Q6K0P9 492 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MED27Q6P2C8 311 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SERPINA13PQ6UXR4 307 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 RTL4Q6ZR62 310 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SMIM5Q71RC9 77 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 HAVCR2Q8TDQ0 301 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 NXNL1Q96CM4 212 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CYP2S1Q96SQ9 504 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CIB1Q99828 191 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZDHHC6Q9H6R6 413 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 RANBP3Q9H6Z4 567 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZFP14Q9HCL3 533 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 STRCQ7RTU9 1775 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CNTNAP1P78357 1384 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 A0A1W2PPM1 405 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 DUXAA6NLW8 204 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 M0R2N6 131 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ABCB7O75027 752 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ENTPD6O75354 484 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 EOMESO95936 686 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 C9P02748 559 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 MPSTP25325 297 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 TUSC3Q13454 348 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 DAG1Q14118 895 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 GK5Q6ZS86 529 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms