RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 AasdhpptQ9CQF6 309 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Cnbd2Q9D5U8 673 aa16.21■□□□□ 0.19
Shh-201ENSMUST00000002708 Fam124aD3Z5V4 536 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Obox5G3X9P6 291 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 GzmkO35205 263 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Lhx8O35652 367 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Btnl2O70355 454 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Rab8aP55258 207 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Rab3ipQ68EF0 428 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 UnkQ8BL48 810 aaKnown RBP16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Sfr1Q8BP27 319 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Svs2Q8BS30 375 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Capn8Q91VA3 703 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 NlnQ91YP2 704 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Diras1Q91Z61 198 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Oas1cQ924S2 362 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Gins4Q99LZ3 223 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Rpl17Q9CPR4 184 aaKnown RBP16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Cmc1Q9CPZ8 106 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Q9D454 513 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Pou5f2Q9DAC9 329 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Tmem8aQ9ESN3 769 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Dnah12Q3V0Q1 3086 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 L3mbtl1A2A5N8 826 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Itga8A2ARA8 1062 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Gml2G5E8L7 176 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Polr2jO08740 117 aaKnown RBP16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Gsta1P13745 223 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Etv4P28322 485 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Apex1P28352 317 aaKnown RBP16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 RxraP28700 467 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Htr5bP31387 370 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Cyp2c37P56654 490 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Pros1Q08761 675 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Fut7Q11131 389 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Tmem255bQ5FW56 369 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Gsta1Q6P8Q0 223 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Mrps35Q8BJZ4 320 aaKnown RBP16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr1361Q8VFH0 317 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Socs7Q8VHQ2 579 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Scd3Q99PL7 359 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Dph2Q9CR25 489 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Plscr1Q9JJ00 328 aa16.2■□□□□ 0.18
Shh-201ENSMUST00000002708 Krt28A6BLY7 462 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Map2k3O09110 347 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Ncam2O35136 837 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Ring1O35730 406 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Ifrd1P19182 449 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Ugt2b34Q8K154 532 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Lurap1lQ8K2P1 221 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Vwa1Q8R2Z5 415 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Znf24Q91VN1 368 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 B3galt6Q91Z92 325 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Fads1Q920L1 447 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Slc35a5Q921R7 437 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 AassQ99K67 926 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Duoxa2Q9D311 320 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Efhd2Q9D8Y0 240 aaKnown RBP16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Vmn1r65Q9EPS7 332 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Hipk3Q9ERH7 1192 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Hapln2Q9ESM3 341 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Sh3glb1Q9JK48 365 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Hs6st1Q9QYK5 411 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Vsig10l2A0A140LHF2 776 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Smurf2A2A5Z6 748 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Zfp992B1ASD8 573 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Spdye4cI6XKQ3 339 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 LifP09056 203 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 MaptP10637 733 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Grin2cQ01098 1239 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 SobpQ0P5V2 864 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Zbtb2Q3V3W4 514 aaKnown RBP16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Tex13c3Q810P0 219 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 B430218F22RikQ8BQR5 223 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Slc45a3Q8K0H7 553 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Zfp991Q8R1N3 573 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Igsf8Q8R366 611 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr330Q8VGD9 315 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Pcdhb19Q91Y01 801 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Gstt3Q99L20 241 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Rnf146Q9CZW6 359 aa16.19■□□□□ 0.18
Shh-201ENSMUST00000002708 Olfr1153A2AVC0 318 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Tmem45a2B7ZWJ5 289 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Zfp938E9Q9G3 579 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 JunbP09450 344 aaKnown RBP16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 GlrbP48168 496 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Rundc3bQ6PDC0 408 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Cpped1Q8BFS6 312 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Zfp418Q8BFS8 652 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Fut11Q8BHC9 489 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Vrk2Q8BN21 503 aaKnown RBP16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Piwil2Q8CDG1 971 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Gm5591Q8CDK1 855 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Vmn1r198Q8R263 300 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Apbb2Q9DBR4 760 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Akap8lQ9R0L7 642 aaKnown RBP16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Zfp626A0A0U1RQ84 676 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 4933424G06RikA0A140LIP3 267 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 Cylc1A0A1B0GR13 642 aa16.18■□□□□ 0.18
Shh-201ENSMUST00000002708 E030030I06RikJ3QML9 246 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms