RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ELNP15502 786 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 YBEYP58557 167 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 LSM3P62310 102 aaKnown RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 CTSL3PQ5NE16 218 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 ZDHHC13Q8IUH4 622 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 FNDC8Q8TC99 324 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 CD200R1Q8TD46 325 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 FAM162AQ96A26 154 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 INTS10Q9NVR2 710 aaKnown RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 TCRBV5S2A0A599 114 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 HS6ST1O60243 411 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 VPS4BO75351 444 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 DEAF1O75398 565 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 GKP32189 559 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 ARSFP54793 590 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 PHEXP78562 749 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 MEP1AQ16819 746 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 FAM98BQ52LJ0 330 aaKnown RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 SLC44A4Q53GD3 710 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 RNF219Q5W0B1 726 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-221ENST00000640341 MBOAT1Q6ZNC8 495 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 UROC1Q96N76 676 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 BOCQ9BWV1 1114 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 CIPCQ9C0C6 399 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 SLC52A3Q9NQ40 469 aa14.4□□□□□ -0.1
SCARB2-221ENST00000640341 IGLV3-10A0A075B6K4 115 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 ARVCFO00192 962 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 S100BP04271 92 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-221ENST00000640341 C21orf59P57076 290 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 ELMSAN1Q6PJG2 1045 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 KRTCAP2Q8N6L1 136 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 GPR150Q8NGU9 434 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 CGREF1Q99674 301 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 TBC1D23Q9NUY8 699 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 ADGRE2Q9UHX3 823 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 FCF1Q9Y324 198 aaKnown RBP14.39□□□□□ -0.11
SCARB2-221ENST00000640341 PKP3Q9Y446 797 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-221ENST00000640341 FAM234BA2RU67 622 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 ANKRD66B4E2M5 251 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 FLT3LGP49771 235 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 ACVR1Q04771 509 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 ZNF177Q13360 481 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-221ENST00000640341 TAF12Q16514 161 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 TYSND1Q2T9J0 566 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 R3HCC1LQ7Z5L2 792 aaKnown RBP14.39□□□□□ -0.11
SCARB2-221ENST00000640341 SPRED1Q7Z699 444 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 OR2T12Q8NG77 320 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 CDC26Q8NHZ8 85 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 C8orf48Q96LL4 319 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 TOR3AQ9H497 397 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 ARMC7Q9H6L4 198 aa14.39□□□□□ -0.11
SCARB2-221ENST00000640341 ZBBXA8MT70 800 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 TOR1BO14657 336 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 PRLP01236 227 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 CYP4B1P13584 511 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 ZFP36L2P47974 494 aaKnown RBP14.38□□□□□ -0.11
SCARB2-221ENST00000640341 TTPAP49638 278 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 SUOXP51687 545 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 TAF1AQ15573 450 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-221ENST00000640341 GOLGA7Q7Z5G4 137 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 GALNT5Q7Z7M9 940 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 GALNT7Q86SF2 657 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 SLC22A15Q8IZD6 547 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 CARNMT1Q8N4J0 409 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 G3V2T6 193 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 PFDN6O15212 129 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 XYLBO75191 536 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 SEC22BO75396 215 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 OAZ2O95190 189 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 TSPAN12O95859 305 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 B3GALT4O96024 378 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 ANXA6P08133 673 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 THRBP10828 461 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 HOXB8P17481 243 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-221ENST00000640341 ALDH4A1P30038 563 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 CCND3P30281 292 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-221ENST00000640341 GTF2H2Q13888 395 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 DSC3Q14574 896 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 CPSF6Q16630 551 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCARB2-221ENST00000640341 CCNYL2Q5T2Q4 361 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 MFSD14CQ5VZR4 134 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 GTF2H2CQ6P1K8 395 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 ULK4Q96C45 1275 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 TDRD1Q9BXT4 1180 aaKnown RBP14.38□□□□□ -0.11
SCARB2-221ENST00000640341 IKZF5Q9H5V7 419 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 CARS2Q9HA77 564 aaKnown RBP14.38□□□□□ -0.11
SCARB2-221ENST00000640341 Q9Y3F1 56 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 DRGXA6NNA5 263 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 ACSL4O60488 711 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 LRATO95237 230 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 AGXTP21549 392 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 ATP5C1P36542 298 aaKnown RBP14.38□□□□□ -0.11
SCARB2-221ENST00000640341 SLC11A2P49281 568 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 ARHGEF7Q14155 803 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 MAPKAPK3Q16644 382 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 SPANXN4Q5MJ08 99 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 GALNT18Q6P9A2 607 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms